| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0059 |
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| Symbol | ispD |
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| ID | 3229038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 55137 |
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| End bp | 55820 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637119629 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_180812 |
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| Protein GI | 57233576 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTTTGA ATGAAAAAGT CGGGGCAGTT ATTGTAGCTG CCGGCCAGAG CCGCCGGATG
GGCGGGCAGG ACAAAATATT TGCCCGGCTT TCGGGTAAAC CTGTTTTGGC TCACACCCTT
TCGGTTTTTC AGCAGTCCCC GGAGATAGAT GATATTGCCC TGGTGGTATC CGAACACAAT
CTTAAAAAAG CTAAAGAACT GGTCAAAGAA TATAATTTCA GCAAGGTAAT TGCTATATGC
TCCGGCGGCG AACTCCGTCA GGACTCCGTT TCTTCAGGGC TGACTGCCTT GTGTGATTGC
GGCTGGGTGC TTATTCATGA CGGGGCGCGC CCTCTGCTTG ACCCTGTCTC CATACCCGAA
GGGCTGGAAG CGGCCAAACT CTGCGGTTCG GCCGTTGCGG CCGTACCCCT CAAAGACACC
GTCAAGGAAA TATCCCCAGA AGGGCTGGTG GAAAAGACCC TGCCTAGGGA AAAACTGATA
TCTGTCCAGA CGCCTCAGGT ATTTAGGGCA GACATTATCC AGAAAGCCTA CCGCAGGGTG
GGCATAACCG CCACTGATGA TGCCCAACTG GTAGAAAAGC TGAAGCTCCC GGTCAAGATA
TTCTCCGGCG CATATGCTAA TATAAAGATA ACCACACCCG AAGACCTGCT TATGGCAGAA
ATACTGCTGA AGAAAGGACG GTGA
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| Protein sequence | MFLNEKVGAV IVAAGQSRRM GGQDKIFARL SGKPVLAHTL SVFQQSPEID DIALVVSEHN
LKKAKELVKE YNFSKVIAIC SGGELRQDSV SSGLTALCDC GWVLIHDGAR PLLDPVSIPE
GLEAAKLCGS AVAAVPLKDT VKEISPEGLV EKTLPREKLI SVQTPQVFRA DIIQKAYRRV
GITATDDAQL VEKLKLPVKI FSGAYANIKI TTPEDLLMAE ILLKKGR
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