| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0049 |
|---|
| Symbol | |
|---|
| ID | 3229055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | + |
|---|
| Start bp | 40831 |
|---|
| End bp | 41841 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637119619 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_180804 |
|---|
| Protein GI | 57233593 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.331576 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACCGGA GTAATTTAGA GGCCATACTT AAGCCCTGTT TGTGCCTGGA TATAGGCGGC
AGTAAAATCC GCTCGGCGGT AGTGACCCAT GACGGACGGG TGGTGGCCTG GGAACAGGAG
CCTACCTGCG CCCGGAACGG GGCGGAGGGT GTATTTGAGA ATATCTGCCG GGTGCTTGAG
CGCCTGCTTG AGCGTAACAA CCTTTGTATC TCCCAGTTTG AGGCCCTGTC TGCGGCGGTA
GCCGGGGGTA TAGATATGCC AAACGGACTG GTTACCCAGT CTCCCCATCT GCCCGTCTGG
CGGGATGTAC CCCTTCGGGA TATGCTGGCA GAGCGTTATC TTAAAACATT CCTTATAAAT
GATGCCTCGG CCGCCGCTTT GGCCGAACAC AAACTGGGAG CGGGGCGGGG GGTTAAAAAC
CTGGTTTACC TGACGGTCTC TACCGGTATC GGGGGCGGTA TTATTATAAA TGATGAGCTT
TATCTGGGGC AGAGCGGCTG TGCCGGTGAA ATAGGGCATA TGTGTCTGGA TATAAACGGC
ACTGAAGATG TCTGCGGCAA TGTGGGCTGT CTGGAAACGC TGGCTTCGGG TACGGCTATT
GTCCGCAGGG TTCAGGCCGA ACTTGCCGGG GGTGAGTTTT CCCTGCTTTC AGAGCGGTTT
AAGGCGGATT ACTCCGCTTT GACGGCTGAG GATATCGGCC GGGCGGCTTC CGAAGGTGAC
AGGCTGTGCC AGGGGGTTAT CCGCCGGGCA GGCGAATATT TGGGAATAGG TCTGGCCGGT
ATTGCCAATA TATTTAACCC TGAGCTTATT ATACTGGGGG GTGGGGTTTC CAAACTGGGG
GAGATTTTTA TTGAGCCTGC CCGCAAAATG CTTTTCAAAC GGGCTTTCCG TCTGGCGGGG
GATGATGTCC GGCTGGTTGC TTCGTTTCTG GGGGATAATG CCGGGGTGAC CGGGGCGGCA
CTTTATGCCT ACGGCTGCCT GGGGGGCGGG GGTAAACCTT CTCAGGGCTG A
|
|---|
| Protein sequence | MNRSNLEAIL KPCLCLDIGG SKIRSAVVTH DGRVVAWEQE PTCARNGAEG VFENICRVLE
RLLERNNLCI SQFEALSAAV AGGIDMPNGL VTQSPHLPVW RDVPLRDMLA ERYLKTFLIN
DASAAALAEH KLGAGRGVKN LVYLTVSTGI GGGIIINDEL YLGQSGCAGE IGHMCLDING
TEDVCGNVGC LETLASGTAI VRRVQAELAG GEFSLLSERF KADYSALTAE DIGRAASEGD
RLCQGVIRRA GEYLGIGLAG IANIFNPELI ILGGGVSKLG EIFIEPARKM LFKRAFRLAG
DDVRLVASFL GDNAGVTGAA LYAYGCLGGG GKPSQG
|
|---|
| |