Gene DET0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0047 
Symbol 
ID3229057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp38985 
End bp40184 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content51% 
IMG OID637119617 
ProductDNA polymerase III delta subunit-related protein 
Protein accessionYP_180802 
Protein GI57233595 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00913059 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCGG AGTTCGTAGG GCATTACAAC TTCTTCGGGC ATTGTTTCAA ATCCTCCAAG 
TGCAGCTTAC GGGCAGATTG TAACATACTG CCAGGCATTT TTGCACTAAA CTTCAAAGGT
TACGCGCCCG TTTCGTTATG CTACAATATC AGCCGAAGGT GGCTGTTAAA TTTGCTGTAT
ATTTTTACCG GCAGTGATGA TTTTTCCCTG AAAGAACGCC TGAAGCAGAT AAAACTGGCT
TTGGGTGATG AGTCTTTGTC CTCTGCCAAT ACCACCATGC TGGAGGGCAA AAACCTGACG
GCTGCCGAAC TTCAAAACTA TGTCCAGACT ATTCCCTTTT TAGCCCCTGC CCGGCTGGTT
ATGGTAAACG GCCTGCTGGA GAGGTTTGAA GGCTCAAAAG GTAAAGCCGC CGCCAAAGAT
AAGGCAGACA AAAACAGCCC GGATGAATTT GCCCGGGCGC TGTCTAATCT GCCTCCCACA
ACCCTGGCGG TGCTTCTGGA CTATACCACC GCTAAAGACG GTGATTACCG TGAAAAAGAA
AAAGTATCCG CTTTGGCCTC AAACCCCCTT TTTAAGCTGG TAAGCCCCGG TGCTGAGGTA
AAGCACTTTG CACCCCTTTC TGCCCAGAAC CTGCCCGGCT GGGTAATGCA GCGTGCCAAA
CAGTCTTCTA TCCAGATGTC TGTTCCGGCA GCCCGTCTGC TGGCCCGTTT TGTGGGGGCG
GACTTGTGGG CGCTTTCCTC CGAGATTGAG AAACTGGGCT TGTATGCCCA GGGGCGGGCG
GTGGAGGAAG CCGATGTTGA AAATATGGTG GGTTATTCCC AGGAAGTAAA TATATTCGGT
TTGGTGGATG CCGTACTGGA CCGCAAGGTT AAAGACGCCC AGCAGTCTCT GGCGGCTTTT
ACTGCCGGCG GCGGGTCACC CGGTTTTTTG CTGTTTATGC TGGTACGCCA GCTGCGGCTG
ATGGTGCGTT ATACCGCCCT TAAAAAGCGG GGGCTGAAAG AGGCCGAGAT TTTTAAAGCT
ATGGGCGGCT CTGAGTACGC CCTTAGGAAA ACAGCCTCTC AGGCGGCCTG CCAGAACATG
GACAGCCTTA AAGCTATTTA TTCCAAACTG CTGGAAACAG ATTTTAATAT AAAAACCGGC
CGCTTTGAAC CGGAGCTGGC CATGGGTTTG CTGGTTGCCG AACTTTGCGG GAGAAAATAG
 
Protein sequence
MFAEFVGHYN FFGHCFKSSK CSLRADCNIL PGIFALNFKG YAPVSLCYNI SRRWLLNLLY 
IFTGSDDFSL KERLKQIKLA LGDESLSSAN TTMLEGKNLT AAELQNYVQT IPFLAPARLV
MVNGLLERFE GSKGKAAAKD KADKNSPDEF ARALSNLPPT TLAVLLDYTT AKDGDYREKE
KVSALASNPL FKLVSPGAEV KHFAPLSAQN LPGWVMQRAK QSSIQMSVPA ARLLARFVGA
DLWALSSEIE KLGLYAQGRA VEEADVENMV GYSQEVNIFG LVDAVLDRKV KDAQQSLAAF
TAGGGSPGFL LFMLVRQLRL MVRYTALKKR GLKEAEIFKA MGGSEYALRK TASQAACQNM
DSLKAIYSKL LETDFNIKTG RFEPELAMGL LVAELCGRK