| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0029 |
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| Symbol | |
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| ID | 3229090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 25680 |
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| End bp | 27125 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637119599 |
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| Product | Trk system potassium uptake protein, putative |
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| Protein accession | YP_180784 |
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| Protein GI | 57233628 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.725548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA ATAACGTTCT CCATTACCTG GGGCTGGTTA TTGCCATCTT GGGCGGCTTC
ATGTTTATCC CCTTTGTTTT CAGCCTGATA AACGCAGAGC CGGACCAATT AGCTTTCGGC
GTTTCCATTG TCATCACCTT AAGTGCCGGC TTTCTGCTGT GGCGTTTCAC CCCCATTACC
GAAAGGCGTA TCAGCCTGCG CGAATCCCTG GCTATTGTGG CCGGCAGCTG GATTATGGCC
GCCCTTTTCG GTTCGCTTCC CTTTATCATT TCAGGGGTGC TTCCCAGTGT CATAGACTGT
ATCTTTGAGG CTATGAGCGG CCTGACTACC ACCGGTGCCA GTGTATTCAG CAGCGTAGAA
AATTTGCCTC ACGGCATACT TGTCTGGCGT TCCCTTACCC AGTGGATAGG CGGCTTGGGC
ATTATCATGC TGTTTGTGAC CATTCTGCCC ATGCTGGGCA TAGGCGCTTC CCAGCTTATG
GAAGCCGAAA CCCCCGGTCA GCAGGAACGG CTGACCTCGC GTATCCGGGA TACCGCAAGA
ACATTGTGGC TGCTTTATCT GGGCTTTACA GTAGCCGGTT TTATAGCCCT TATGCTGGCC
GGTCTGCCCG GGTTTGATGC CTTTAATATT ATCCTGACCA CTACCCCCAC CGGAGGCTTT
GCCCCGGTAA GCAGTATCGG GGTGTATAAC AATCTGGCGG TTGAGCTTAT TCTTATTTTC
TTCATGGTAG CCAGCGGGGT AAACTTCGGG CTGTATTATT ACCTGCTCTG GAAAGGCCGC
CCGGCCAAAT TTTTCGGCAA TGCGGAGTTC AAGTTATACA TAGGTATCCT GATAGGCTGT
ATTCTGCTGA TAAACTGGGA CTTGGTAGCC AATGCCGGAA TGGGTATCTT TGAAGGTCTG
CGCCAGGCCA GCTTCCAGAC AGCTTCGGTT ATGACTACCA CCGGTTTTGC CACCGCTGAT
TTCGCCCAGT GGCCTCACTT TTCACAGGCT ATTTTACTGG TGCTTATGGT AGTAGGCGCA
TCTGCCGGTT CTACCGGGGG CGGCCTAAAG GTAATCCGCC TGCTGGTTTT ATTTAAATAT
ACTTACCGCC GTATTCAGCT TACTTTCAAC CCCAACGCGG TTATACCCAT CAAAATAGGC
GGCTATGTTA TTTCAGACAA GCTTATCTCC CGTTCGGTAG GCCTGACTAT ACTCTACTTT
GCCACCCTGT GGGCAGGCTT TTTAGTAATG AGTGCCATAG GGCTGGACTT CGTTACCGCC
CTATCCAGCA TCACCTCCTG TTTGGGAAAC GTAGGCCCGG CGCTGGGTAC TGTCGGTCCC
ATGGCCAGTT ATGCGGACAT ACCCGGTATC GGCAAACTGG TACTCCTTAC AGCCATGCTG
GTGGGCAGAA TAGAGCTATT CACCCTGCTG GTTTTGTTCA TACCGGCCTT CTGGCGCTGG
CGTTAA
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| Protein sequence | MKINNVLHYL GLVIAILGGF MFIPFVFSLI NAEPDQLAFG VSIVITLSAG FLLWRFTPIT
ERRISLRESL AIVAGSWIMA ALFGSLPFII SGVLPSVIDC IFEAMSGLTT TGASVFSSVE
NLPHGILVWR SLTQWIGGLG IIMLFVTILP MLGIGASQLM EAETPGQQER LTSRIRDTAR
TLWLLYLGFT VAGFIALMLA GLPGFDAFNI ILTTTPTGGF APVSSIGVYN NLAVELILIF
FMVASGVNFG LYYYLLWKGR PAKFFGNAEF KLYIGILIGC ILLINWDLVA NAGMGIFEGL
RQASFQTASV MTTTGFATAD FAQWPHFSQA ILLVLMVVGA SAGSTGGGLK VIRLLVLFKY
TYRRIQLTFN PNAVIPIKIG GYVISDKLIS RSVGLTILYF ATLWAGFLVM SAIGLDFVTA
LSSITSCLGN VGPALGTVGP MASYADIPGI GKLVLLTAML VGRIELFTLL VLFIPAFWRW
R
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