Gene DET0025 details

Gene Information

• Locus tag: DET0025
• ID: 3229101
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: -
• Start bp: 23427
• End bp: 23927
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637119595
• Product: competence protein ComEA, putative
• Protein accession: YP_180780
• Protein GI: 57233638
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1555] DNA uptake protein and related DNA-binding proteins

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.13299
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGTTA CTAAAAGATT TGCCCTGCTG CTGGGGCTTG CCTTGGCAGT GCTAAGCGCT 
CAGGGATGTT CGGAAACTGC ACCGCTTGAG GTATATACCC CCTCCCAGAT TAGCCCGAAC 
CAGCTTGAGA TAAATATTTC AGGCAATATA AAGCTGCCGG GTATTTACCC CGGAAACACC 
CGGGATACCC TTCAGAGCCT GCTTGAAGCC GCAGGCGGAC TAATGGATAA CTCAGAGCTT 
ACAACTATCT ACCTCAGTTT CAATCCGCCT GTACCAGGGT CTTCAGCCCA GAAAATAGAC 
CTGAACCGGG CGGAAATCTG GCTGCTGGTT GCCCTGCCAG GCATAGGCGA AGCAAGGGCA 
AACGATATTG TCACCTACCG CAACCAAAAC GGGGGCTTTA AAAATACTCT GGAACTGATG 
CTGATTCCCG GCTTCAGCCA GAGTCTTTAT GACCAGATAA AAGACCTGAT ATGTGTTTCT 
GAAACGGCAG ATATGCCTTG A 

 

Protein sequence

MKVTKRFALL LGLALAVLSA QGCSETAPLE VYTPSQISPN QLEINISGNI KLPGIYPGNT 
RDTLQSLLEA AGGLMDNSEL TTIYLSFNPP VPGSSAQKID LNRAEIWLLV ALPGIGEARA 
NDIVTYRNQN GGFKNTLELM LIPGFSQSLY DQIKDLICVS ETADMP