Gene DET0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0008 
Symbol 
ID3229135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp10741 
End bp11367 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content52% 
IMG OID637119578 
Productmembrane protein 
Protein accessionYP_180763 
Protein GI57233672 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACTCC TGATAGGATA TTTTCTGGGT TCTATCCCCT CTGCTTATCT GGTCACCCGC 
CGCCTAACCG GGCGGGATAT ACGCCAGATG GGCGGGGGAA ATATGGGGGG GCTAAATACC 
TTCCGCGAAG TAGGCGTGGG GGCAGGTGCG GCAGTAGTAC TGATGGACCT GGCCAAAGGC 
GCTCTGGCAG TTTCGGTTGC CTATTACCTG CTTATCCAAA ATGCCCAGTG GGTTATCCTG 
ACCGGCTTTG CAGCGGTAAT CGGCCATAAC TGGCCTATCT GGCTGGATTT CAAGGGCGGC 
AAAGGTTTGG GACCAGCCTT CGGGGCAATG CTCTTCTTAC TGCCTGTTTA CGGTCTTCCC 
CAGCATCTGC TCATACTGGC ACTTTTAGTT TTTATACCCT TAGCCATTAC CCGAAACATA 
GCTTTAGCCA CCGGAATTGC CCTGTTCAGC CTGCCTTTTT TAGTCTGGTA TGGCAGCCAT 
TCCGAATTTG CCACCCTGAT ATCCGTCCTG CTCTTTTTGA TGATAGGCAT AAAGTTCGTA 
CTGGACAACA GGAAAAACCT GCGTGACCCG GCTAACCGCC GCAATCTGAT AGTTGACCAC 
TGGAAACGGC CGGATAAGAA CAGTTAG
 
Protein sequence
MSLLIGYFLG SIPSAYLVTR RLTGRDIRQM GGGNMGGLNT FREVGVGAGA AVVLMDLAKG 
ALAVSVAYYL LIQNAQWVIL TGFAAVIGHN WPIWLDFKGG KGLGPAFGAM LFLLPVYGLP 
QHLLILALLV FIPLAITRNI ALATGIALFS LPFLVWYGSH SEFATLISVL LFLMIGIKFV 
LDNRKNLRDP ANRRNLIVDH WKRPDKNS