Gene DET0006 details

Gene Information

• Locus tag: DET0006
• Symbol: hisS
• ID: 3229137
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 8328
• End bp: 9584
• Gene Length: 1257 bp
• Protein Length: 418 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637119576
• Product: histidyl-tRNA synthetase
• Protein accession: YP_180761
• Protein GI: 57233674
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0124] Histidyl-tRNA synthetase
• TIGRFAM ID: [TIGR00442] histidyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.14648
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTACCAGT CACCCAGAGG TACAGAAGAT ATACTGCCTG AAGACCAGCC TTACTGGCAT 
TTTGTCAGGC AGCAGGCCGC CCGGATAGCC GCCCTGTACG GTTACCAGCG GACAGATACA 
CCCGTTTTTG AAGATGCCGG GCTGTTTGTG CGGAGTGTTG GCGAGGGGAC AGACATTGTC 
TCCAAGGAAA TGTATACCTT TGAAGACCGG GGCGGAGACA AACTGACTTT GCGTCCTGAA 
GGGACTGCCC CCATTTGCCG GGCTTACCTT GAGCATGGCA TGCAGACCCG CACCAAGCCG 
GTCAAGCTTT ATTATCTTAG CTCTATTTTC CGTTATGACC GCCCCCAAGC CGGGCGTTAC 
CGCCAGCACC ACCAGTTTGG TTTTGAGGCT ATTGGCGAGG CTGATGCTTC GCTGGATGCC 
GAAGTTATAG AAATGGCCTG GCGTTTTTAC AATCTGCTGG GTATCAATGA CCTTTCGCTG 
GAGTTAAACA GCATAGGCTG CCGTGAGTGC CGCCCTGCCT ATATTTCGGC CCTTAAAGCT 
TATTACGGGC AGCATGAAGG AAAGCTTTGT TCAGACTGTA AAACCCGTTT GGATAAAAAC 
ACCCTGCGTT TGCTGGACTG CAAGCGGGAG GAATGCCAGT GCGTGGCTGA AAATGCTCCC 
CGCAGCGCAG ATTACCTTTG CCCGGACTGC CTTGCCCACT ATAACCGCCT GAAGGAGTGC 
CTGACGGTAG TGGATTTGCC CTTCCATGAA AATTTCCGTC TGGTAAGGGG TCTTGATTAC 
TACAGCCGCA CTGTTTTTGA AATCCAGCCC AGGATAGAGG GTGCCCAGAG TACCATTGGC 
GGCGGAGGGC GTTATGACGG GCTGATAGAA CAGCTTGGCG GAGAGCCTAC CCCGGCCATA 
GGTTTTGCTA CCGGTATTGA GCGGATTATT TTAAACCTGA AGCGGCAGGG TATTACCCCG 
CCTCCCTTGC CTTCCCCTTC GGTTTTTCTG GCTTATATGG GAGAGGCCGC CTCTTTAGCT 
TCAATTGCTT TGGCATCAGA CCTGCGTAAA GCGGGTATAG GTATATACCA GACATATGCC 
CAAAAGAGTA TTAAGGCTCA GCTCAGGCAG GCCAACAGCC TGGGTGCAGA CTGGGCGGTG 
ATACTGGGTG AAGAAGAACT GAAACAGGGC TGTGCTGTCC TCCGGAATAT GAAAGAGGCC 
GGTCAGGCAA CCATACCCCT TGACCAGCTG ATTTGTGAGA TAAAAAAACA GATATGA 

 

Protein sequence

MYQSPRGTED ILPEDQPYWH FVRQQAARIA ALYGYQRTDT PVFEDAGLFV RSVGEGTDIV 
SKEMYTFEDR GGDKLTLRPE GTAPICRAYL EHGMQTRTKP VKLYYLSSIF RYDRPQAGRY 
RQHHQFGFEA IGEADASLDA EVIEMAWRFY NLLGINDLSL ELNSIGCREC RPAYISALKA 
YYGQHEGKLC SDCKTRLDKN TLRLLDCKRE ECQCVAENAP RSADYLCPDC LAHYNRLKEC 
LTVVDLPFHE NFRLVRGLDY YSRTVFEIQP RIEGAQSTIG GGGRYDGLIE QLGGEPTPAI 
GFATGIERII LNLKRQGITP PPLPSPSVFL AYMGEAASLA SIALASDLRK AGIGIYQTYA 
QKSIKAQLRQ ANSLGADWAV ILGEEELKQG CAVLRNMKEA GQATIPLDQL ICEIKKQI