Gene TC0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTC0889 
Symbol 
ID1246257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlamydia muridarum Nigg 
KingdomBacteria 
Replicon accessionNC_002620 
Strand
Start bp1033025 
End bp1033633 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content40% 
IMG OID637061702 
Productpeptidoglycan associated lipoprotein, putative 
Protein accessionNP_297262 
Protein GI15835503 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.831236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTGGGGC GCATTTCCTT CACAACACAT AAAGAAAGCA TCATGAGAAA GACTATTTTT 
AAAGCGTTTA ATTTATTATT ATCCCTTCTT TTCCTTTCTT CATGCTCTTA TCCTTGTAGA
GATTGGGAGC GCCATGGTTG CGATTCTGCA AGACCTCGCA AATCATCTTT CGGATTCGTG
CCTTTTTATT CTGATGAAGA AATTCAACAG GCCTTTGTTG AAGATTTTGA TTCCAAAGAA
GAGCAACTTT ACAAAACGAG CGCACAGAGC ACTTCCTTCC GAAATATTAC TTTCGCGACA
GATAGTTATT CCATCAAAGG AGAAGACAAC CTGACTATTC TCGCAAGCTT AGTTCGTCAT
CTACGAAAAT CTCCTAAAAC TACCTTATAT ATCGAAGGGC ATACTGATGA GCGTGGAGCA
GCTGCGTATA ATCTGGCTTT GGGAGCTCGT CGTGCGAATG CAGTGAAACA ATATCTTATA
AAACAAGGTA TTGCTTCCGA CCGTTTATTT ACTATTTCCT ATGGTAAAGA GCATCCCGTT
CATTCGGGTC ATAATGAACT TGCCTGGCAA CAAAATCGTC GTACTGAATT TAAGATCCAT
GCTCGCTAA
 
Protein sequence
MLGRISFTTH KESIMRKTIF KAFNLLLSLL FLSSCSYPCR DWERHGCDSA RPRKSSFGFV 
PFYSDEEIQQ AFVEDFDSKE EQLYKTSAQS TSFRNITFAT DSYSIKGEDN LTILASLVRH
LRKSPKTTLY IEGHTDERGA AAYNLALGAR RANAVKQYLI KQGIASDRLF TISYGKEHPV
HSGHNELAWQ QNRRTEFKIH AR