Gene TC0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTC0843 
Symbol 
ID1246211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlamydia muridarum Nigg 
KingdomBacteria 
Replicon accessionNC_002620 
Strand
Start bp977671 
End bp981279 
Gene Length3609 bp 
Protein Length1202 aa 
Translation table11 
GC content40% 
IMG OID637061656 
ProductSNF2 family helicase 
Protein accessionNP_297216 
Protein GI15835457 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTCTTA TGATTCTAAA CTCATTATCC ATGTTTCGTC GTCAGGCTAC CCGCTTCTTA 
CAAGATAACA GAGAATCTAT AGCCGTTTCT TTTTTTAAAA ATACCTATAA AATCACCATT
CCTGATGAAG ACTCCCCTGA TGGAGAGTGG ATCAGCACCC TATCATTTAA TGAAGAAGAG
CGCTTGTCCT TTGCGGCTTG TAGTTGCCCA GATGGAGACT GCTGCGAGCA TCTTCTTATA
GCAACCTTAG CAGCTTACAC TCCAACAGAA GGAGCTCTTC TCCATACCAA ATTTGAAGCT
TCATTTTGGT GGAGACTGTT TTGTAAACTT TTCCTAAGCA AAGCCTCGTT ACAAGCTCCT
GGAGAAAAGA TTTATACTGT AAAATCTGAG CAGATTTCTG TATCCATTCA ATGTCTCTCT
GCAGAATCTC TCACTTCTTG GCTACCTATC GTACATAACT CCCCTGAGCC TCAAAAAATA
ACTGAAGAGA CATTCCCCCA ATCCGCACTC TATCGAATAG CTCGAGAACT ATTTCTATAT
ACTCAGAAGG GCGCCTCTTT AATTGTCCAA GAAAATCCCC AAGGATTCCC TTCTTTATTC
TCTTTTCAAT GGGCTGGAAT ATCCTTAACT ATCGAAATCC TAGATGTTGA TACTCTAAAA
GAACTCTTCC CTTTGCTAGA GCTTTCCCAA ACCTCCCTAT ACAATGGAGA CTCTTATCTT
CTTCGTGACG TTCATGTAGT CCCAGAACAA GCAAAGATCT ATTTTACTAA AGAATATCCC
CCTCTTTCTA AATCCATTAG AGAATACCAA GCAACTAACC TAGGCTCTAT AGAGTATTTC
GCTGGGGCAC ACAAATGCAC TGCTATCCCT CAAAAACTTT CTCTTCCTAT ACATATTATC
CCTGCTTTAG ATCATTCTTT CAGAGAACAA CTACTCTCCC AGCTCTGTTA CGAAACAGAA
GAACGCCCTA TTCATTATGA TATTCATTTC TTCAGGGATG CTTCTCTCTC CTTTTCCGCC
TACTTAGAAA CTCCAGGAGA TTTGGCAGAA GGCCACATTA TCTATCCAGG ATTCTGTTAC
ATCCCTAATA AAGGCCTGCT AGCTGTATCT GGCCTATTAT CCCCAGAATC TACATTCACC
ATACGCGCGG ATCATATAGA ATCTTTCTTA GATGAATATG GAGCACTGAT TAAAGAGCCT
GGATTTGAAA CGTTTTCTAA CAAATCACCG ACAGGAACCT TATCTTATAG CGTGACCGAA
CAAGGAGTGC TTCTATTCCA CTATGACACT GGGAACTCCT CTGACATTGA ACTCAATTTT
GGTAAATGGA CCTACTATTC AAGACAAGGG TTTTTCCTGA ACAGTCGTTT AGACCTTGCT
CTCCAAGATG GCCTAACCAT AGAAGCTCCT CACGTGGCAG ATTTTATTTT AAAACATGAG
GTGGCTCTCA AATCCATCCC GAACTTCTTT GCTCCACAGC CACCCCTCAA AACTATCCGC
TTTGAAGTTC ATAAAGAAAA AAAAGGTGTA GGAATTTACC TTAAACCGAT ATTCGAGGGA
TTAGAACAAG AGTCCTGCCG CCTATTTGGC CAATTTTTGT ATCGAGAAAA CATAGGCTTC
AGTTTGCTTC CAGCCTCTTT ACAAATGGTC TGCCAGATTC CTACAGAAGT TCCCGCTAAT
CAGGTAACGG AATTTTTACT ACAATTCTCG AAAGATGATC GCATGATCTT TCCTGATCCT
CAACTTGCTC TACCAGAACA AGTTCAATTA AACATCCTTT CTATTCAACG GCCTCATCCA
TCTTCTCCCC TTCACCTAAA GCTAGAAATT AAAACCAACA TTGGTTCGAT TTCTCTGGGC
ACAGTGCTAC AAGCCTTAAA AGGGAAAAAA GAATTTTTAT TCAGCAAAGC GGGCTTTTTA
AATCTGGACA ATTGTTTATT TGTTTTCCTA AAACAATTTT TGTCATCTCA ACGCTACGAC
ATCCAAGAAA GCACCTTAAT TACAATGGTT ACAGACATCT TTAAATTAGA TGCTCTGGCG
CCTCTTATCA CAGATCCTAA TATTGATGCC TCGGAAGAAG ATCTAGCGTA TTTCTCGCAA
TTGAAATCCG CTTGCCTTCC TCCCATCCCT ATGAACTTAT TTTCTACAGA TCATAAACTC
CGCCCTTACC AAAATAGCGG GCTTTTGTGG TTATGGTTTT TATACAACCA CCGGCTATCC
GGTCTTCTTT GCGATGAAAT GGGATTAGGA AAGACACATC AAGCAACAGC TTTGCTCGAT
ATCGTTGCAC AAACAGCAAA AAATCCAAAA TTTTTAGTGG TTTGTCCAAC CAGCGTATTA
CCTCACTGGG AGCTCGTACT CGCTTCACAT CTTCCGAAGG CTACCCTCTT TTCTTTCCAT
GGCCCTCATA AGCCTAAAAC ACTTCCTGAT TGCGATATTA TCATCACTTC ATACGGCACC
TTACGACAAA ACTACGCTCT ATTTTATAAA GTTTCTTTCA CTGTTGCTGT GTTCGATGAA
ATTCACATGG CTAAAAACAA ATCGAGCCAG ATTCATAAAA TTCTTTGTCG TTTAGATGCT
CAGATGAAAC TTGGACTCAC AGGAACGCCT GTAGAAAATA ATCTCATCGA ATTCAAAGGG
CTTTTAGATA TCATTCTGCC AAACTATCTT CCTTCCGATG GCTTGTTCAA ACGTTTATTC
ACTCATAAGA ACTCATCTGA AACAGACGAG AATATTGTCT CTTCTAAGGA TCTACTACTT
AAACTGACTC GCCCGTTCAT TCTAAGAAGA ACGAAAAAAC TTGTCCTTCC TGAACTACCA
GACAAGGTAG AATCTTTGAT TCCTTGTCAG CTTTCTCCTG AGCAGGCTCA GCTATACGCC
TCAACTTTGA AAAAAGAAAA ATGCCAGATC CAACAACTTG AAAAAGAAGA CGATCCAGCT
GCAGTAAACT ACCTGCATGT GTTTGCTCTT CTCAATCAAC TCAAACAGAT CTGTGATCAT
CCCGCTATTT ATTTCAAAGA CCCTGAGTCT TATAAAAACT ATGCCTCCGG GAAATGGGCT
GCCTTTGTGA AATTACTAAA TGACTCCCTA GCTTCCGGAT ATAAAGTCGT CGTTTTCTCT
CAATACATTC AAATGATCCG CATCATTTCT CTGTATCTAG AAGAACAGAA CATCCAATAT
GCTTTAGTAC AAGGGAAATC CCAGAATAGA AAAGAAGAAA TCGACCGCTT CTCAAATGAT
CCAAACTGCC GCGTCTTTAT AGGGTCTCTA CTTGCAGCAG GTACAGGAAT TAACCTAACA
GCAGGGAATG TCGTGATCAT GTACGACCGC TGGTGGAATC CTGCTAAAGA AAATCAAGCT
TTGGACCGCG TACACAGAAT TGGGCAAAAA AACACTGTTT TCATTTACAA ACTTGTAACT
GAAGATACTC TCGAAGAGCA TATCCACTAC CTAATAGAAA AGAAAATGCG CTTATTGAAT
CAAGTAACGA CAACTCAAGA CTCCAATATT CTGCATGTTT TGAATCGCGA GGATTTAATC
ACTATTCTTT CTTACAAGGA TGAGCATGGG TTATCTGACG AAGTTCAAGA AGACTCTGGA
GATTCTTAG
 
Protein sequence
MILMILNSLS MFRRQATRFL QDNRESIAVS FFKNTYKITI PDEDSPDGEW ISTLSFNEEE 
RLSFAACSCP DGDCCEHLLI ATLAAYTPTE GALLHTKFEA SFWWRLFCKL FLSKASLQAP
GEKIYTVKSE QISVSIQCLS AESLTSWLPI VHNSPEPQKI TEETFPQSAL YRIARELFLY
TQKGASLIVQ ENPQGFPSLF SFQWAGISLT IEILDVDTLK ELFPLLELSQ TSLYNGDSYL
LRDVHVVPEQ AKIYFTKEYP PLSKSIREYQ ATNLGSIEYF AGAHKCTAIP QKLSLPIHII
PALDHSFREQ LLSQLCYETE ERPIHYDIHF FRDASLSFSA YLETPGDLAE GHIIYPGFCY
IPNKGLLAVS GLLSPESTFT IRADHIESFL DEYGALIKEP GFETFSNKSP TGTLSYSVTE
QGVLLFHYDT GNSSDIELNF GKWTYYSRQG FFLNSRLDLA LQDGLTIEAP HVADFILKHE
VALKSIPNFF APQPPLKTIR FEVHKEKKGV GIYLKPIFEG LEQESCRLFG QFLYRENIGF
SLLPASLQMV CQIPTEVPAN QVTEFLLQFS KDDRMIFPDP QLALPEQVQL NILSIQRPHP
SSPLHLKLEI KTNIGSISLG TVLQALKGKK EFLFSKAGFL NLDNCLFVFL KQFLSSQRYD
IQESTLITMV TDIFKLDALA PLITDPNIDA SEEDLAYFSQ LKSACLPPIP MNLFSTDHKL
RPYQNSGLLW LWFLYNHRLS GLLCDEMGLG KTHQATALLD IVAQTAKNPK FLVVCPTSVL
PHWELVLASH LPKATLFSFH GPHKPKTLPD CDIIITSYGT LRQNYALFYK VSFTVAVFDE
IHMAKNKSSQ IHKILCRLDA QMKLGLTGTP VENNLIEFKG LLDIILPNYL PSDGLFKRLF
THKNSSETDE NIVSSKDLLL KLTRPFILRR TKKLVLPELP DKVESLIPCQ LSPEQAQLYA
STLKKEKCQI QQLEKEDDPA AVNYLHVFAL LNQLKQICDH PAIYFKDPES YKNYASGKWA
AFVKLLNDSL ASGYKVVVFS QYIQMIRIIS LYLEEQNIQY ALVQGKSQNR KEEIDRFSND
PNCRVFIGSL LAAGTGINLT AGNVVIMYDR WWNPAKENQA LDRVHRIGQK NTVFIYKLVT
EDTLEEHIHY LIEKKMRLLN QVTTTQDSNI LHVLNREDLI TILSYKDEHG LSDEVQEDSG
DS