Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TC0843 |
Symbol | |
ID | 1246211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlamydia muridarum Nigg |
Kingdom | Bacteria |
Replicon accession | NC_002620 |
Strand | + |
Start bp | 977671 |
End bp | 981279 |
Gene Length | 3609 bp |
Protein Length | 1202 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637061656 |
Product | SNF2 family helicase |
Protein accession | NP_297216 |
Protein GI | 15835457 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTCTTA TGATTCTAAA CTCATTATCC ATGTTTCGTC GTCAGGCTAC CCGCTTCTTA CAAGATAACA GAGAATCTAT AGCCGTTTCT TTTTTTAAAA ATACCTATAA AATCACCATT CCTGATGAAG ACTCCCCTGA TGGAGAGTGG ATCAGCACCC TATCATTTAA TGAAGAAGAG CGCTTGTCCT TTGCGGCTTG TAGTTGCCCA GATGGAGACT GCTGCGAGCA TCTTCTTATA GCAACCTTAG CAGCTTACAC TCCAACAGAA GGAGCTCTTC TCCATACCAA ATTTGAAGCT TCATTTTGGT GGAGACTGTT TTGTAAACTT TTCCTAAGCA AAGCCTCGTT ACAAGCTCCT GGAGAAAAGA TTTATACTGT AAAATCTGAG CAGATTTCTG TATCCATTCA ATGTCTCTCT GCAGAATCTC TCACTTCTTG GCTACCTATC GTACATAACT CCCCTGAGCC TCAAAAAATA ACTGAAGAGA CATTCCCCCA ATCCGCACTC TATCGAATAG CTCGAGAACT ATTTCTATAT ACTCAGAAGG GCGCCTCTTT AATTGTCCAA GAAAATCCCC AAGGATTCCC TTCTTTATTC TCTTTTCAAT GGGCTGGAAT ATCCTTAACT ATCGAAATCC TAGATGTTGA TACTCTAAAA GAACTCTTCC CTTTGCTAGA GCTTTCCCAA ACCTCCCTAT ACAATGGAGA CTCTTATCTT CTTCGTGACG TTCATGTAGT CCCAGAACAA GCAAAGATCT ATTTTACTAA AGAATATCCC CCTCTTTCTA AATCCATTAG AGAATACCAA GCAACTAACC TAGGCTCTAT AGAGTATTTC GCTGGGGCAC ACAAATGCAC TGCTATCCCT CAAAAACTTT CTCTTCCTAT ACATATTATC CCTGCTTTAG ATCATTCTTT CAGAGAACAA CTACTCTCCC AGCTCTGTTA CGAAACAGAA GAACGCCCTA TTCATTATGA TATTCATTTC TTCAGGGATG CTTCTCTCTC CTTTTCCGCC TACTTAGAAA CTCCAGGAGA TTTGGCAGAA GGCCACATTA TCTATCCAGG ATTCTGTTAC ATCCCTAATA AAGGCCTGCT AGCTGTATCT GGCCTATTAT CCCCAGAATC TACATTCACC ATACGCGCGG ATCATATAGA ATCTTTCTTA GATGAATATG GAGCACTGAT TAAAGAGCCT GGATTTGAAA CGTTTTCTAA CAAATCACCG ACAGGAACCT TATCTTATAG CGTGACCGAA CAAGGAGTGC TTCTATTCCA CTATGACACT GGGAACTCCT CTGACATTGA ACTCAATTTT GGTAAATGGA CCTACTATTC AAGACAAGGG TTTTTCCTGA ACAGTCGTTT AGACCTTGCT CTCCAAGATG GCCTAACCAT AGAAGCTCCT CACGTGGCAG ATTTTATTTT AAAACATGAG GTGGCTCTCA AATCCATCCC GAACTTCTTT GCTCCACAGC CACCCCTCAA AACTATCCGC TTTGAAGTTC ATAAAGAAAA AAAAGGTGTA GGAATTTACC TTAAACCGAT ATTCGAGGGA TTAGAACAAG AGTCCTGCCG CCTATTTGGC CAATTTTTGT ATCGAGAAAA CATAGGCTTC AGTTTGCTTC CAGCCTCTTT ACAAATGGTC TGCCAGATTC CTACAGAAGT TCCCGCTAAT CAGGTAACGG AATTTTTACT ACAATTCTCG AAAGATGATC GCATGATCTT TCCTGATCCT CAACTTGCTC TACCAGAACA AGTTCAATTA AACATCCTTT CTATTCAACG GCCTCATCCA TCTTCTCCCC TTCACCTAAA GCTAGAAATT AAAACCAACA TTGGTTCGAT TTCTCTGGGC ACAGTGCTAC AAGCCTTAAA AGGGAAAAAA GAATTTTTAT TCAGCAAAGC GGGCTTTTTA AATCTGGACA ATTGTTTATT TGTTTTCCTA AAACAATTTT TGTCATCTCA ACGCTACGAC ATCCAAGAAA GCACCTTAAT TACAATGGTT ACAGACATCT TTAAATTAGA TGCTCTGGCG CCTCTTATCA CAGATCCTAA TATTGATGCC TCGGAAGAAG ATCTAGCGTA TTTCTCGCAA TTGAAATCCG CTTGCCTTCC TCCCATCCCT ATGAACTTAT TTTCTACAGA TCATAAACTC CGCCCTTACC AAAATAGCGG GCTTTTGTGG TTATGGTTTT TATACAACCA CCGGCTATCC GGTCTTCTTT GCGATGAAAT GGGATTAGGA AAGACACATC AAGCAACAGC TTTGCTCGAT ATCGTTGCAC AAACAGCAAA AAATCCAAAA TTTTTAGTGG TTTGTCCAAC CAGCGTATTA CCTCACTGGG AGCTCGTACT CGCTTCACAT CTTCCGAAGG CTACCCTCTT TTCTTTCCAT GGCCCTCATA AGCCTAAAAC ACTTCCTGAT TGCGATATTA TCATCACTTC ATACGGCACC TTACGACAAA ACTACGCTCT ATTTTATAAA GTTTCTTTCA CTGTTGCTGT GTTCGATGAA ATTCACATGG CTAAAAACAA ATCGAGCCAG ATTCATAAAA TTCTTTGTCG TTTAGATGCT CAGATGAAAC TTGGACTCAC AGGAACGCCT GTAGAAAATA ATCTCATCGA ATTCAAAGGG CTTTTAGATA TCATTCTGCC AAACTATCTT CCTTCCGATG GCTTGTTCAA ACGTTTATTC ACTCATAAGA ACTCATCTGA AACAGACGAG AATATTGTCT CTTCTAAGGA TCTACTACTT AAACTGACTC GCCCGTTCAT TCTAAGAAGA ACGAAAAAAC TTGTCCTTCC TGAACTACCA GACAAGGTAG AATCTTTGAT TCCTTGTCAG CTTTCTCCTG AGCAGGCTCA GCTATACGCC TCAACTTTGA AAAAAGAAAA ATGCCAGATC CAACAACTTG AAAAAGAAGA CGATCCAGCT GCAGTAAACT ACCTGCATGT GTTTGCTCTT CTCAATCAAC TCAAACAGAT CTGTGATCAT CCCGCTATTT ATTTCAAAGA CCCTGAGTCT TATAAAAACT ATGCCTCCGG GAAATGGGCT GCCTTTGTGA AATTACTAAA TGACTCCCTA GCTTCCGGAT ATAAAGTCGT CGTTTTCTCT CAATACATTC AAATGATCCG CATCATTTCT CTGTATCTAG AAGAACAGAA CATCCAATAT GCTTTAGTAC AAGGGAAATC CCAGAATAGA AAAGAAGAAA TCGACCGCTT CTCAAATGAT CCAAACTGCC GCGTCTTTAT AGGGTCTCTA CTTGCAGCAG GTACAGGAAT TAACCTAACA GCAGGGAATG TCGTGATCAT GTACGACCGC TGGTGGAATC CTGCTAAAGA AAATCAAGCT TTGGACCGCG TACACAGAAT TGGGCAAAAA AACACTGTTT TCATTTACAA ACTTGTAACT GAAGATACTC TCGAAGAGCA TATCCACTAC CTAATAGAAA AGAAAATGCG CTTATTGAAT CAAGTAACGA CAACTCAAGA CTCCAATATT CTGCATGTTT TGAATCGCGA GGATTTAATC ACTATTCTTT CTTACAAGGA TGAGCATGGG TTATCTGACG AAGTTCAAGA AGACTCTGGA GATTCTTAG
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Protein sequence | MILMILNSLS MFRRQATRFL QDNRESIAVS FFKNTYKITI PDEDSPDGEW ISTLSFNEEE RLSFAACSCP DGDCCEHLLI ATLAAYTPTE GALLHTKFEA SFWWRLFCKL FLSKASLQAP GEKIYTVKSE QISVSIQCLS AESLTSWLPI VHNSPEPQKI TEETFPQSAL YRIARELFLY TQKGASLIVQ ENPQGFPSLF SFQWAGISLT IEILDVDTLK ELFPLLELSQ TSLYNGDSYL LRDVHVVPEQ AKIYFTKEYP PLSKSIREYQ ATNLGSIEYF AGAHKCTAIP QKLSLPIHII PALDHSFREQ LLSQLCYETE ERPIHYDIHF FRDASLSFSA YLETPGDLAE GHIIYPGFCY IPNKGLLAVS GLLSPESTFT IRADHIESFL DEYGALIKEP GFETFSNKSP TGTLSYSVTE QGVLLFHYDT GNSSDIELNF GKWTYYSRQG FFLNSRLDLA LQDGLTIEAP HVADFILKHE VALKSIPNFF APQPPLKTIR FEVHKEKKGV GIYLKPIFEG LEQESCRLFG QFLYRENIGF SLLPASLQMV CQIPTEVPAN QVTEFLLQFS KDDRMIFPDP QLALPEQVQL NILSIQRPHP SSPLHLKLEI KTNIGSISLG TVLQALKGKK EFLFSKAGFL NLDNCLFVFL KQFLSSQRYD IQESTLITMV TDIFKLDALA PLITDPNIDA SEEDLAYFSQ LKSACLPPIP MNLFSTDHKL RPYQNSGLLW LWFLYNHRLS GLLCDEMGLG KTHQATALLD IVAQTAKNPK FLVVCPTSVL PHWELVLASH LPKATLFSFH GPHKPKTLPD CDIIITSYGT LRQNYALFYK VSFTVAVFDE IHMAKNKSSQ IHKILCRLDA QMKLGLTGTP VENNLIEFKG LLDIILPNYL PSDGLFKRLF THKNSSETDE NIVSSKDLLL KLTRPFILRR TKKLVLPELP DKVESLIPCQ LSPEQAQLYA STLKKEKCQI QQLEKEDDPA AVNYLHVFAL LNQLKQICDH PAIYFKDPES YKNYASGKWA AFVKLLNDSL ASGYKVVVFS QYIQMIRIIS LYLEEQNIQY ALVQGKSQNR KEEIDRFSND PNCRVFIGSL LAAGTGINLT AGNVVIMYDR WWNPAKENQA LDRVHRIGQK NTVFIYKLVT EDTLEEHIHY LIEKKMRLLN QVTTTQDSNI LHVLNREDLI TILSYKDEHG LSDEVQEDSG DS
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