| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0842 |
|---|
| Symbol | |
|---|
| ID | 1246210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlamydia muridarum Nigg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002620 |
|---|
| Strand | + |
|---|
| Start bp | 976270 |
|---|
| End bp | 977511 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637061655 |
|---|
| Product | branched-chain amino acid transport system carrier protein, putative |
|---|
| Protein accession | NP_297215 |
|---|
| Protein GI | 15835456 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1114] Branched-chain amino acid permeases |
|---|
| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0718198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATCATGC ATAAGAAAAC ACAATCACCT TCTCAAGAAG GCTTTTCCGT TTGGTCTATT
GGAGGCTCTA TTTTTGCTAT GTTCTTTGGA GCAGGCAATG TTGTCTTCCC TTTGGCCTTG
GGACACCATT TCTATCATCA TACCTCTTAC GCTTGTTTAG GCATGATGCT GACAGCCGTA
TTGACGCCTT TGTTAGGGCT CTTTGCGATG ATGCTATACT CCGGGGACTA CCGTTCTTTC
TTCTCTTCCA TTGGTAGAAT GCCTGGTATG ATCGTGATGG TGGCTATTCT ATGCATTATT
GGACCTTTTG GAGGAGTCCC TAGAACCATT GCTGTATCTT ACGATACGTT GGCTTCGTTA
GGTAACACTC AATCTACGCT GTTACCCTCT TTACCGTGGT TCAGCCTAGT ATTTTGTGTA
CTCGTCTATC TTTTTGTATG TAAGCTTAGC AAACTCATTC AATGGTTAGG ATCCGTCTTT
TTCCCTGTCA TGCTTGCGAC TTTAGCTTGG CTAATTATTA AAGGCTTGTC GATACCAAGT
CACGCGCCAT CCTTAGAAAA CGAGCCTTTC TCTAAGCAAC AAGCCTTTGT TGCAGGACTA
ACGGAAGGAT TTAACACGAT GGACCTGCTG GCAGCGTTTT TCTTCTGCTC TATCGTTCTT
GTGTCCATTC AACAATTTGT TGTTCAGCAA GATCACAAGT CTTCTGAAGA AAAACCCTTA
GAATTTCACC ATATTGGTAA GGCTGAAAAA TACAAATTAG GGATGAGCTT CCTTCTAGCA
GCAGCTCTTC TTAGCCTTGT CTATCTAGGC TTTGCATACT GCGCAGCTCG TCATGCGGGC
GCTCTTGTAA ATATTCAACG AGGACAAATT TTAGGTAGAA TTTCAGCCAT TATTTTCGGC
CCTAATAGTT TCTTAACGGG GATATGCGTC TTTCTAGCTT GCTTAACCAC AGCAATCGCA
GCGACAGGAA TTTTTGCAGA CTTCATTGCA AGGGTAGTAT CCTCACAAAA AATGAGCTAC
TCCAACGCGA TAATAGTTAC TTTAGTTCCC TCATACTTAG TATCTATTCT AAGTTTTGAG
AACATTAGTA AGATCCTCCT TCCTATCTTA GAAGTGAGTT ATCCCGCACT CATCGCTTTA
ACTTGTGGCG TCATAGCGAA AAAACTTTGG GGGTTCCGTC AGGCAAAAAC TTTATTTTAC
CTTGTTTTTG TGTTGACTCT ACTCTATAAA CTATCCGTTT AA
|
|---|
| Protein sequence | MIMHKKTQSP SQEGFSVWSI GGSIFAMFFG AGNVVFPLAL GHHFYHHTSY ACLGMMLTAV
LTPLLGLFAM MLYSGDYRSF FSSIGRMPGM IVMVAILCII GPFGGVPRTI AVSYDTLASL
GNTQSTLLPS LPWFSLVFCV LVYLFVCKLS KLIQWLGSVF FPVMLATLAW LIIKGLSIPS
HAPSLENEPF SKQQAFVAGL TEGFNTMDLL AAFFFCSIVL VSIQQFVVQQ DHKSSEEKPL
EFHHIGKAEK YKLGMSFLLA AALLSLVYLG FAYCAARHAG ALVNIQRGQI LGRISAIIFG
PNSFLTGICV FLACLTTAIA ATGIFADFIA RVVSSQKMSY SNAIIVTLVP SYLVSILSFE
NISKILLPIL EVSYPALIAL TCGVIAKKLW GFRQAKTLFY LVFVLTLLYK LSV
|
|---|
| |