| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0839 |
|---|
| Symbol | |
|---|
| ID | 1246207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlamydia muridarum Nigg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002620 |
|---|
| Strand | + |
|---|
| Start bp | 973160 |
|---|
| End bp | 974476 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637061652 |
|---|
| Product | D-alanyl-D-alanine carboxypeptidase, putative |
|---|
| Protein accession | NP_297212 |
|---|
| Protein GI | 15835453 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTC TTTCTTTGTT GTGCAGGTTC TTTATCTGCT CAAGTCCTCT TTTTCTACAG
CCCGCTTCTT TGCTAGCCGC TTCTCCCGCC ATCACAACAA AAGGATTAGC CGCCGCAGTC
ATGCACGCAG ATTCCGGAGC TATTCTTAAA GAAAAGAACC TAGATCAAAA GATTTTCCCT
GCAAGCATGA CAAAGATTGC CACAGCCTTG CTCATCTTAC GAAAACACCC TGATGTTTTA
ACTCGATTTA TCACTATCCG AAGAGAACCT CTTACCTCCA TCACCCCTCA GGCAAAACAA
CAATCCGGAT ACCGAAGTCC TCCCCACTGG CTGGAAACGG ATGGTGTGGC CATCCAATTA
AAATCCAAAG AAGAAGTTTC TGGTTGGGAT CTTTTCCACG CACTTCTAAT TAGTTCTGCC
AACGATGCTG CTAATGTTCT GGCAGATGCT TGTTGTCAAA GTGTTCCCGC TTTCATGCAT
CAGCTCAATG ATTTCTTAAA AGAGATTGGC TGTCAAAATA CCCACTTTAA TTCTCCTCAC
GGCCTCCACC ACCCTGACCA CTACACTACC GCTAGAGATC TAGCTATCAT TATGAAAGAA
GCGTTAAAAG AACCCCTATT CTGTCAGGTC ATTCGCACAG CCTCCTATAC CATGGAGTCA
ACAAATCTAA GCCCAGAAAG AACGCTATCT TCCACCAATC GCCTTCTTTC CTCTTCTTCA
ACCTACTTTT ATCCTCCCTG TTTAGGAGGG AAAACAGGCA CAACCAAAAG CGCAGGGAAA
AATATTGTCT TTGCAGCAGA AAAGAATAAC CGTTCGATTA TCGTCGTGGC AGCCGGCTAT
TTTGGTCCTG CAGCACAACT TTACCAAGAT GCTATCGCTG TATGTGAAGA TTTATTCAAT
GAGCAGCTAT TACGTTGCTT CTTGCTCCCT CCTGCTAGTC AGTACTCCGT GAAAACCAAA
TTTGGACCCA TAACTGCCCC GGTATCTCAA GGAATTTATT ATGACTTTTA TCCTTCCGAA
GGGGACCCCC TCTTATCCCT TTCTCTGGAA TCGTCTAAAA TCGCTTTCCC TATTCGACAA
GGAGATCTTT TAGGTCACTG GATTCTATCC TCCCCCTCAG GAGAAAAAGT TCATTCCATC
CCATTCCTAG CAGAAAGCGA TATCCTTCCC TCCTTTAAGC AACGGATTCT TTTAACCAGT
CTGCGAATCC TTACCTCGTA TCGGACCTAT GTCCTTATCT TGCTTTTCTT TTTGCTCAAT
CGAAAGAAAA AACATTCCCG AGCCACTAAA ACTTTTTCTA ACCCTTTTTT CTCTTAA
|
|---|
| Protein sequence | MRILSLLCRF FICSSPLFLQ PASLLAASPA ITTKGLAAAV MHADSGAILK EKNLDQKIFP
ASMTKIATAL LILRKHPDVL TRFITIRREP LTSITPQAKQ QSGYRSPPHW LETDGVAIQL
KSKEEVSGWD LFHALLISSA NDAANVLADA CCQSVPAFMH QLNDFLKEIG CQNTHFNSPH
GLHHPDHYTT ARDLAIIMKE ALKEPLFCQV IRTASYTMES TNLSPERTLS STNRLLSSSS
TYFYPPCLGG KTGTTKSAGK NIVFAAEKNN RSIIVVAAGY FGPAAQLYQD AIAVCEDLFN
EQLLRCFLLP PASQYSVKTK FGPITAPVSQ GIYYDFYPSE GDPLLSLSLE SSKIAFPIRQ
GDLLGHWILS SPSGEKVHSI PFLAESDILP SFKQRILLTS LRILTSYRTY VLILLFFLLN
RKKKHSRATK TFSNPFFS
|
|---|
| |