Gene TC0801 details

Gene Information

• Locus tag: TC0801
• Symbol: rplF
• ID: 1246168
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: -
• Start bp: 941595
• End bp: 942146
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637061613
• Product: 50S ribosomal protein L6
• Protein accession: NP_297174
• Protein GI: 15835415
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00557608
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGTA AAGCTCGAGA CCCTATTGTA CTTCCTCAAG GCGTAGAGGT CTCTATTCAA 
AATGATGAAA TCTCAGTAAA AGGTCCTAAA GGGTCTTTGA CACAGGTGTT GGCTAAAGAA 
GTTGAGATTG CCGTTAAAGG TAATGAGGTG TTTGTTTCTC CCGCAGCTCA CATTATAGAC 
AGACCTGGTC GTATGCAAGG GCTTTATTGG GCTTTGATAG CAAATATGGT CAAAGGTGTC 
CACCTTGGAT TTGAAAAACG TTTAGAAATG ATCGGAGTTG GATTCAGAGC TTCGGTACAG 
GGGTCCTTCT TAGATTTATC GATAGGGGTT TCCCATCCAA CAAAAATGCC TATTCCTACA 
GGATTGGAAG TCTCTGTTGA GAAGAACACA TTGATCTCCA TCAAAGGTAT CAACAAGCAG 
TTGGTAGGAG AATTTGCGGC TTGTGTTCGT GCAAAACGCC CTCCAGAGCC ATACAAAGGT 
AAAGGAATTC GTTACGAAAA CGAATATGTA CGTCGTAAGG CTGGAAAAGC AGCGAAAACT 
GGTAAAAAAT AG 

 

Protein sequence

MSRKARDPIV LPQGVEVSIQ NDEISVKGPK GSLTQVLAKE VEIAVKGNEV FVSPAAHIID 
RPGRMQGLYW ALIANMVKGV HLGFEKRLEM IGVGFRASVQ GSFLDLSIGV SHPTKMPIPT 
GLEVSVEKNT LISIKGINKQ LVGEFAACVR AKRPPEPYKG KGIRYENEYV RRKAGKAAKT 
GKK