Gene TC0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTC0796 
SymbolrpsM 
ID1246163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlamydia muridarum Nigg 
KingdomBacteria 
Replicon accessionNC_002620 
Strand
Start bp938443 
End bp938811 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content41% 
IMG OID637061608 
Product30S ribosomal protein S13 
Protein accessionNP_297169 
Protein GI15835410 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000812257 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACGCA TCATTGGAAT AGATATTCCT GCGAAAAAGA AATTAAAAAT AAGTCTTACA 
TATATTTATG GAATAGGGCC AGCTCTTTCT GAAGAGATCA TTGCTAGATT GCAGTTGAAT
CCCGAAGCGA GAGCTGCAGA GTTGACTGAA GAAGAAGTCG GTCGACTGAA CGCTCTTTTA
CAGTCGGATT ATGTTGTTGA GGGAGATTTG CGCCGTCGTG TGCAGTCCGA TATCAAACGT
CTAATTACCA TCCATGCTTA TCGTGGACAA AGACATAGAC TTTCTTTGCC TGTTCGTGGT
CAGAGAACAA AAACAAATTC TCGCACTCGT AAAGGTAAAC GTAAAACTGT TGCAGGTAAG
AAGAAATAA
 
Protein sequence
MPRIIGIDIP AKKKLKISLT YIYGIGPALS EEIIARLQLN PEARAAELTE EEVGRLNALL 
QSDYVVEGDL RRRVQSDIKR LITIHAYRGQ RHRLSLPVRG QRTKTNSRTR KGKRKTVAGK
KK