Gene TC0778 details

Gene Information

• Locus tag: TC0778
• Symbol: rho
• ID: 1246143
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: -
• Start bp: 919008
• End bp: 920267
• Gene Length: 1260 bp
• Protein Length: 419 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637061588
• Product: transcription termination factor Rho
• Protein accession: NP_297151
• Protein GI: 15835392
• COG category: [K] Transcription
• COG ID: [COG1158] Transcription termination factor
• TIGRFAM ID: [TIGR00767] transcription termination factor Rho

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCAGTGA CAAAGATTGC TAAACTACAA CGCATGGGCA TTAATGAGCT GAATGTTTTA 
GCGCGGCAAT ATGGGGTGAA GAATGTAGGT TCCCTGACGA AATCGCAGGT AGTGTTCGAA 
ATCGTTAAAG CTAAGTCTGA ACGTCCTGAT GAGTTTTTGA TTGGTGAGGG AGTTTTAGAA 
GTTCTCCCAG ATGGCTTTGG GTTTCTGAGA TCTCCTACAT ACAACTATCT TCCTTCTGCA 
GAGGATATTT ATGTTTCTCC AGCGCAGATT CGTCGTTTTG ATTTGAAGAA AGGAGATACT 
ATCGTTGGAA CGATCCGTTC TCCTAAGGAG AAAGAGAAGT ATTTTGCTTT ATTGAAAGTA 
GATAAAATCA ACGGTTCGAC TCCCGATAAA GCGAAAGAAA GAGTTTTATT TGAGAACTTA 
ACCCCACTGC ATCCTAATGA GCGGTTAATC ATGGAGATGG GGAAAGAAAA CCTGGCGGAG 
CGTGTATTGG ATTTAACAGC TCCAATTGGT AAGGGACAAC GAGGGCTGAT TGTGGCTCCG 
CCTCGTTCCG GGAAAACAGT GATTTTGCAG AGTATTGCGC ACGCCATTGC TGTAAATAAT 
CCTGATGCAG AGCTCATTGT ATTACTGATT GATGAGCGTC CTGAAGAAGT TACTGATATG 
ATTCGTCAGG TTCGAGGTGA AGTTGTTGCA TCGACTTTTG ATGAACAGCC TGATCGACAT 
ATTCAAGTTG CTGAAATGGT AATTGAAAAG GCAAGACGTT TAGTTGAGCA CGGTAAAGAT 
GTTGTGATTT TACTAGATTC TATTACGCGT TTAGCTCGTG CATATAACAC TGTGCAACCA 
CATTCAGGAA AAATCCTCAC TGGAGGGGTA GATGCCAGTG CCTTACATAA ACCTAAGCGT 
TTCTTTGGTG CGGCTAGAAA TATTGAAGGT GGTGGGTCTC TAACGATTTT AGCCACAGCG 
TTAATTGATA CGGGGTCAAG AATGGATGAG GTGATCTTTG AGGAATTCAA AGGAACCGGA 
AACATGGAAT TAGTTCTTGA TCGGCACCTT TCTGATCGTA GAATTTATCC TGCTATTGAT 
TTGATTAAGA GCGGAACACG AAAAGAAGAA TTGCTATACC ATCCAGGAGA GTTAGAGAAA 
GTGCGGCTGT TCCGGCAGGC TATAGCTGGC TTAACAGCAA TAGATGCAAT GCAGTTGCTT 
CTTGGTCGGT TGAAAAAGAC AAATAGCAAC ACAGAGTTTC TATTGTCATT AAAGGATTAA 

 

Protein sequence

MAVTKIAKLQ RMGINELNVL ARQYGVKNVG SLTKSQVVFE IVKAKSERPD EFLIGEGVLE 
VLPDGFGFLR SPTYNYLPSA EDIYVSPAQI RRFDLKKGDT IVGTIRSPKE KEKYFALLKV 
DKINGSTPDK AKERVLFENL TPLHPNERLI MEMGKENLAE RVLDLTAPIG KGQRGLIVAP 
PRSGKTVILQ SIAHAIAVNN PDAELIVLLI DERPEEVTDM IRQVRGEVVA STFDEQPDRH 
IQVAEMVIEK ARRLVEHGKD VVILLDSITR LARAYNTVQP HSGKILTGGV DASALHKPKR 
FFGAARNIEG GGSLTILATA LIDTGSRMDE VIFEEFKGTG NMELVLDRHL SDRRIYPAID 
LIKSGTRKEE LLYHPGELEK VRLFRQAIAG LTAIDAMQLL LGRLKKTNSN TEFLLSLKD