| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0714 |
|---|
| Symbol | dapF |
|---|
| ID | 1246077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlamydia muridarum Nigg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002620 |
|---|
| Strand | - |
|---|
| Start bp | 852241 |
|---|
| End bp | 853050 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637061523 |
|---|
| Product | diaminopimelate epimerase |
|---|
| Protein accession | NP_297088 |
|---|
| Protein GI | 15835329 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0253] Diaminopimelate epimerase |
|---|
| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATCCT TTTCTCCTTT AATGACTTAT AGGTATCATC TATATTCTGG AACTGGTAAT
AGTTTTATTT TAGGGGAGTT CATACCTCCC CTCCAACATA TTGTGTTTCT ATGCCAGAAA
GAGAAGGTCG ATGGATTTTT ATGTGTAGAA CCTTCTGAGA TAGCAGATGC TAAGCTAACG
ATTTTTAATA GCGATGGATC TGAAGCTTCT ATGTGTGGCA ATGGATTGCG GTGCGTAATG
GCTCATGTAG CTCAGAGTTT GGGCTTAGAG GATGTTTCCA TTGAAACCGT TCGCGGGGTC
TATCAAGGTA AGTTTTTTTC TATGGATCGA GTATTAGTTG ATATGACATT ACTTGATTGG
AAGAAGACTA AGAAAACATT AACACATGTA TTGCCTGGCA TGCCGGAAGA GGTATTCTTT
ATTGATACGG GAGTCCCGCA TGTTGTTGTC TTTGTTCCTG ATGTGAATAA GGTTCCTGTA
CAAGAATGGG GGGCTTTCCT TCGTTATCAT GAAGATTTTA GGCCTAATGG AGTCAATGTA
GACTTTGTTC AGACAAAGAA AGAAGACACG CTACTTGTTT ATACTTATGA GCGGGGATGC
GAGCGAGAAA CTCTTTCTTG TGGGACAGGA ATGTTAGCGA GTGCTTTAGT TGCTGCAGAT
GTTTTTTCGT TAGAACAAGA TTTTTCTCTG TTAGTATGTT CTCGGAGTGG AAACATTGTT
AAGATTTTTT CTGAAAACGG TAAGGTTTTT TTAGAAGGGC CTGTAACCCT TTTGAATTGT
AGTGAAAATA TTGGGGAGTT TGCCCCCTAA
|
|---|
| Protein sequence | MGSFSPLMTY RYHLYSGTGN SFILGEFIPP LQHIVFLCQK EKVDGFLCVE PSEIADAKLT
IFNSDGSEAS MCGNGLRCVM AHVAQSLGLE DVSIETVRGV YQGKFFSMDR VLVDMTLLDW
KKTKKTLTHV LPGMPEEVFF IDTGVPHVVV FVPDVNKVPV QEWGAFLRYH EDFRPNGVNV
DFVQTKKEDT LLVYTYERGC ERETLSCGTG MLASALVAAD VFSLEQDFSL LVCSRSGNIV
KIFSENGKVF LEGPVTLLNC SENIGEFAP
|
|---|
| |