| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0693 |
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| Symbol | pmpA |
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| ID | 1246054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlamydia muridarum Nigg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002620 |
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| Strand | + |
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| Start bp | 825068 |
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| End bp | 828028 |
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| Gene Length | 2961 bp |
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| Protein Length | 986 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637061500 |
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| Product | polymorphic membrane protein A family protein |
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| Protein accession | NP_297067 |
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| Protein GI | 15835308 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCACAAG CGCTTATAAT AAAGGAACTT ATGAATCAAG TCATAAAAAC CATTGCTCTT
TGCTATCAAA AATATATCTC TAGAGCATCT AACAAAACCT TCTCAATACA TAATACTCTT
TCCCTATCTC TTCTTCCCAA GTGTCTACTT GGATCCCTAA TCATCTATAC CTCACATGCA
TTTGGAGAAA TGGAATTAGC CATTTCTGGG CATAAATATG GCAAAGACAG AGATGCTTTT
ACTATGATCT CCTCATGCCC AGAAGGGACT AATTACATGA TTAACCGTAA GCTCATTCTG
AGCGAATTTT CTTCGCTAGA TAAATTCTCA TCAGGAGGAG CTTTTAAGAA TCTTGCAGGA
AAAATAGCAT TCTTAGGAAA ACACTCCTCT TCCTCGATCC ACTTCAAACA CCTCAACATT
AACGGATTCG GATCCGGAAT CTTTTCCGAA TCTGCTATCG AATTTTCTGA TTTACGCAAA
CTTGTTGCTT TTGGCTCTGA AAGCACTGGA GGCATTTTTA CAGCAAGAGA TGACATCTCA
TTTAAAAATA ATCACTACAT CGCTTTCCGC AACAATATAG CCAAAGGAAA TGGCGGAGTA
ATTTTACTTC AAGGAGATGA AAGAGGAACT GTATCTTTTA CAGATCAACA AGGAGCTATT
ATTTTTGCCA ATAACCAAGC TTTAGTCTCT CCATCTATAA AACATAGTGG GCGTGGAGGA
GCTATTAGCG GAGACTTCGC TGGATCTCGA ATTATTTTTC TCAATAATCA ACAGATCACA
TTTGAAGAAA ATAGTGCTGT TCACGGAGGA GCTATCTACA ATAAAAATGG GGTGGTAGAA
TTTCTTGGCA ATGGAGGCAC TCTTTCTTTT AAAGAGAACA GCACAAGAGC CAATGGAGGT
GCTATATACA CTGGTAAATT CAAAGCAAAT CAACAAACGG CTCCTATTAT ATTTTCACAA
AATAACGCTA ATCAAAAAGG CGGCGCTATT TACGCTCAAT ACGTTAACTT AGAACAAAAT
CAGGATGCTA TTCGTTTTGA AAATAATTCT GCTAAAGAAG GCGGAGGAGC AATCAGCTCA
TCTCAATGCG CAATCACAGC CCACAATAGC ATCACTTTTT CAAACAATTT TGCGGGAGAT
CTTGGAGGCG GAGCTATCCT ATTAGGAGGG AAACAACCAT CGCTATCCTT GGTCGCTCAC
AATGGAAATA TTGCATTTAT TGGCAATACT ATGCTTCCTG CAACAAAAAA GGCCTCTTTA
CCTCGAAATA ATTCGATCTT AGTCAAAGAA TCTCCCTATA AAATTCAATT CGCAGCGAAT
AAAAATCGCT CTATTATTTT CTTTGACCCA GTAATTGCTT TGTCACCTTC TACGTCTCCC
GTAGAGATTA ATTCTCCTGA ACACGAAACG CCTTTCTTCT CTCCTAAAGG AACTATCGTT
TTCTCTGGAG CTAATCTTAT AGACGATGCC AAAGAGGATA TTGCAAATAG AACTTCTATT
TTCAATCAGC CTGTTCTTCT CCATAATGGA ACCCTTTCTA TTGAAAGCGG AGCTCATCTT
GTTGTTCAAA GCTTCAAACA AACTGGTGGA CGAATTAGCT TATCTCCAGG GTCCTCACTA
GCTCTTTATA CAACCAATAC ACTCTTTCAT GGCAATGTTT CTAGCACAGA CCCTTTGGAA
ATTAATGGTT TAAGCCTTGG AGTAGATACT TCTCCTTCCA ACCTTTATTC TGAAATCCGC
GCAGGCAGCG CTCCTCTCAA ATTATCAGGG TCTCCAGATA TTCATGATCC TGAAAGACTG
TTTTATGAAA ATCGGGATTC CGCAGCATCT CCATATCAAA TGGAAATTCT TTTATCCTCT
GACAAAATCA TTGATGTTTC TAACTTTACA ATCGACGCTC CCGTACCAAA TAAAGAAGCT
GGGTTTCAAG GATCTTGGCA CTTCAGCTGG CAGCCCAATA CTGTCAATAA CACTAAACAC
AAGGTATTGC GTGCTTCCTG GATCCCAACT GGCGAATATA TCCTTGAACC AAGCCGTGTT
GGAAATGCTA TCCCTAATTC CTTATGGAGC ACATTTTTAC TTTTGCAAAC GGCTTCTCAT
AACTTAGGAG ATCATTTATG CAATAACTCC GATCTAGTCC CTACTTCATA CTTAGGGCTT
TTAATTGGAG GAATTGGAGC AGAAATGCGC ACTTATTCCG CAGAAAAAGA AAGTTTTATC
TCCCGTTCAG GCACTACAGG AACCACCATT ATACGCTTAA CTCCAACCCT CACTCTATCG
GGAGGTGCGA CGCATATGTT CGGAGATTCC TTTGTTACAA AATTACCAGA ATTCATTGCT
TCTGAAGGAA TGGTACAAAA TGTTGGTCTT ACCCAAATCT TAGGACCATT AACTGTAAAA
TCCACATTAT GTGCAGCCTT AGATCATAAT GCTATGATTC GCCTATCCGC TCAAAAAAAT
CATACACGTG CAAAATGGGA CACTTTTGGA ATACGTGGAA CATTAGGTGC CTCTTATTCA
TTGCTAGACT ATGAAAATAT GGTACGTATT TTCACATTTG CTAATGTTGA AGCCACAAAT
GTTTTACAGA AATCATTTAC GGAAACGGGA TACAATCCAA GAAGTTTTGC AAGAACAAGA
CTCACGAACA TCGCAGTTCC GGTAGGGATT GGGTATGAAT TCTGCTTAAG CAACCACTCT
TTTGCTCTAT TAGGGAAAGG ACATATTGGT TACTCTCGAG ATATCAAACG AAAAAATCCA
GTAACTTTTG CTCAATTAGC TATGAATAAC TTCTCCTGGA CTGCTAATGG CTGCCAAGTC
CCAACCTCAG CACATACAAT AGCGAACCAA CTAATCCTTC GCTATAAAGC CTGCTCCCTA
TACGTAAATG CAGTAGCTAC CAAACTAGAA AGCACATATC TCTCAAGCAG CTTATCTTGC
GGAGGCTATG TTGGTTTCTA A
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| Protein sequence | MPQALIIKEL MNQVIKTIAL CYQKYISRAS NKTFSIHNTL SLSLLPKCLL GSLIIYTSHA
FGEMELAISG HKYGKDRDAF TMISSCPEGT NYMINRKLIL SEFSSLDKFS SGGAFKNLAG
KIAFLGKHSS SSIHFKHLNI NGFGSGIFSE SAIEFSDLRK LVAFGSESTG GIFTARDDIS
FKNNHYIAFR NNIAKGNGGV ILLQGDERGT VSFTDQQGAI IFANNQALVS PSIKHSGRGG
AISGDFAGSR IIFLNNQQIT FEENSAVHGG AIYNKNGVVE FLGNGGTLSF KENSTRANGG
AIYTGKFKAN QQTAPIIFSQ NNANQKGGAI YAQYVNLEQN QDAIRFENNS AKEGGGAISS
SQCAITAHNS ITFSNNFAGD LGGGAILLGG KQPSLSLVAH NGNIAFIGNT MLPATKKASL
PRNNSILVKE SPYKIQFAAN KNRSIIFFDP VIALSPSTSP VEINSPEHET PFFSPKGTIV
FSGANLIDDA KEDIANRTSI FNQPVLLHNG TLSIESGAHL VVQSFKQTGG RISLSPGSSL
ALYTTNTLFH GNVSSTDPLE INGLSLGVDT SPSNLYSEIR AGSAPLKLSG SPDIHDPERL
FYENRDSAAS PYQMEILLSS DKIIDVSNFT IDAPVPNKEA GFQGSWHFSW QPNTVNNTKH
KVLRASWIPT GEYILEPSRV GNAIPNSLWS TFLLLQTASH NLGDHLCNNS DLVPTSYLGL
LIGGIGAEMR TYSAEKESFI SRSGTTGTTI IRLTPTLTLS GGATHMFGDS FVTKLPEFIA
SEGMVQNVGL TQILGPLTVK STLCAALDHN AMIRLSAQKN HTRAKWDTFG IRGTLGASYS
LLDYENMVRI FTFANVEATN VLQKSFTETG YNPRSFARTR LTNIAVPVGI GYEFCLSNHS
FALLGKGHIG YSRDIKRKNP VTFAQLAMNN FSWTANGCQV PTSAHTIANQ LILRYKACSL
YVNAVATKLE STYLSSSLSC GGYVGF
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