Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TC0683 |
Symbol | |
ID | 1246044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlamydia muridarum Nigg |
Kingdom | Bacteria |
Replicon accession | NC_002620 |
Strand | - |
Start bp | 816204 |
End bp | 817001 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637061490 |
Product | spoU rRNA methylase family protein |
Protein accession | NP_297057 |
Protein GI | 15835298 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.827085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTTTA TAGGAAAAAA TAATGCTCGT GTTAAAGCGG CTCTTGCTTT AAAGCGACAG CGAGCACGTA ATAGTTCATA CTTTTTATTA GAAGGGTTCC GCGAGATTCA CCGGGCCTTG ATTTCCGGGT ACCATTGTTT ACATGTGTTT TGCGGAGAAT TGATATCTGA TAAGGAGCGG GATCTTGATA AAGAGCTAAC TGCTCTTGGC ATCGAAAAAT TACCTTGTCC TAAAGAGATA TTAGAGAGGC TCTCTTTTAA GGAGCATCCG GATAATTTCA TTGCTGTTTT TGAAAAAAAA CGGCTCTCTT GCCAAGAGTT TTTGAGATTA CAGCGCAAGA ATCAGCAACC CTTTTATTTG ATTGTTGAGC AAGCAGAAAA ACCAGGGAAT ATTGGGGCAT TGTTGAGAAT TGCTGATGGA GCTGGAGTCG ATGGAGTCAT TCTTTGTGAT CCCGTAGTGG ATTTATATAA TCCTAATGTC ATTCGCTCCT CCTTAGGCGC TGTGTTCACA GTACCTATTT GGCAGGCCTC TTTGGAGGAA GTTTTGGCTC TAGTTCGTGA ACAAGAGTGG AAAATTTTTA CCACTACTCC ATCTACTCAA ACTTTTTATT TTGATCAAAA TTTTTGCCAA CCATTGGCTG TGGTGTTTGG CTCAGAAAAG GATGGACTTT CCCCCTCTTG GTTAGATGGA AGTTTTTGTA ACATCGCTTT GCCTATGCTA GGGAAAGCGG ATTCATTGAA CCTCTCTTCT TCTGTTGCAG CAGTTGCTTA TGAGGTTGTG CGTCAAAGAA GTAGATGA
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Protein sequence | MEFIGKNNAR VKAALALKRQ RARNSSYFLL EGFREIHRAL ISGYHCLHVF CGELISDKER DLDKELTALG IEKLPCPKEI LERLSFKEHP DNFIAVFEKK RLSCQEFLRL QRKNQQPFYL IVEQAEKPGN IGALLRIADG AGVDGVILCD PVVDLYNPNV IRSSLGAVFT VPIWQASLEE VLALVREQEW KIFTTTPSTQ TFYFDQNFCQ PLAVVFGSEK DGLSPSWLDG SFCNIALPML GKADSLNLSS SVAAVAYEVV RQRSR
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