Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TC0589 |
Symbol | rpoB |
ID | 1245948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlamydia muridarum Nigg |
Kingdom | Bacteria |
Replicon accession | NC_002620 |
Strand | - |
Start bp | 705075 |
End bp | 708833 |
Gene Length | 3759 bp |
Protein Length | 1252 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637061394 |
Product | DNA-directed RNA polymerase subunit beta |
Protein accession | NP_296965 |
Protein GI | 15835206 |
COG category | [K] Transcription |
COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAAGT GCCCGGAGCG GGTCAGCATC AAAAAGAAAG AAGATATTTT AGATCTTCCT AATCTTGTCG AAGTTCAAAT CAAGTCGTAT AAGCAGTTTC TTCAAATTGG GAAGCTAGCT GAAGAGCGAG AAAACATTGG TTTAGAAGAA GTCTTCAGAG AAATTTTCCC TATCAAATCA TACAATGAAG CTACGATTTT AGAGTACCTC TCTTATAACT TAGGAGTGCC CAAATACTCC CCAGAAGAGT GTATTCGTCG GGGAATTACT TATAGCGTTA CCTTAAAGGT TCGTTTCCGT TTGACTGATG AAACGGGAAT TAAGGAAGAA GAAGTCTATA TGGGAACTAT TCCTATTATG ACTGACAAGG GAACCTTTAT TATCAATGGA GCAGAAAGGG TCGTTGTTTC TCAAGTTCAC CGTTCTCCAG GGATTAACTT TGAGCAGGAG AAACATTCTA AAGGGAATGT TTTGTTCTCT TTTAGAATTA TTCCTTATCG AGGAAGTTGG TTAGAGGCTT CTTTTGATAT TAATGACCTC ATCTATATTC ACATTGATAG GAAAAAACGT CGTAGAAAGA TTTTAGCTAT GACGTTTATT CGAGCATTGG GGTATTCGAC AGATGCTGAT ATTATCGAAG AATTTTTCGC TGTAGAAGAG CACTCTCTGC GTTCAGAAAA AGATTTTGTT GCTTTAGTTG GTAAAGTTTT AGCAGACAAT GTAGTAGATG CGGATTCTTC GTTAGTTTAC GGGAAGGCTG GAGAGAAACT CAGTACTGCT ATGCTGAAGC GCATTTTGGA TGCTGGGGTA CAATCTTTAA AAATTGCCGT TGGAGCTGAT GAAAATCATC CAATTATCAA GATGTTGGCA AAAGATCCTA CAGATTCTTA CGAAGCTGCT CTTAAAGATT TTTACCGCAG ATTGCGTCCA GGTGAGCCAG CAACTTTAGC TAATGCTCGT TCTACGATTA TGCGTCTATT TTTCGATTCT AAACGTTATA ATTTAGGTCG TGTTGGACGT TATAAATTAA ATAAAAAATT AGGGTTCCCT CTAGATGACG AAACACTGTC TCAAGTGACT TTGAGAAAAG AAGATGTTAT TGGAGCTCTA AAGTATCTAA TTCGTTTGCG AATGGGTGAT GAGAAGACGT CTATCGATGA TATCGACCAT TTGGCAAACC GACGTGTCCG TTCTGTTGGA GAATTAATTC AGAATCATTG CCGATCAGGA TTGGCTAGAA TGGAAAAAAT CGTTCGAGAA AGAATGAATC TCTTCGATTT TTCTTCCGAT ACGTTAACTC CTGGAAAAAT TATTTCTGCC AAAGGGCTAG TTAGTGTCTT GAAAGATTTC TTTAGCCGTT CCCAGTTGTC CCAATTTATG GATCAAACGA ATCCTGTTGC GGAATTGACA CATAAGCGTC GATTATCTGC ATTAGGACCT GGAGGATTGA ATAGGGAAAG AGCCGGTTTT GAAGTTCGAG ACGTTCATTC CAGCCACTAT GGTAGAATTT GTCCAATTGA AACTCCAGAA GGACCAAACA TTGGATTGAT CACTTCCTTG TCCTCTTTTG CTAAGATCAA TGAATTTGGC TTTATTGAGA CTCCTTATCG CGTTGTGCGT GATGGCATCG TAACAGATGA AATTGAGTAC ATGACTGCTG ATGTTGAAGA GGATTGTGTC ATCGCTCAGG CATCTGCGGA GCTTGATGAA TATAACATGT TTAAGGATTC TGTATGTTGG GCTCGGTATA AAGGAGAAGC TTTTGAAGCG GATACGAGTA CGGTCACACA TATGGACGTC TCTCCTAAAC AATTGGTGTC TGTAGTTACC GGGCTTATTC CTTTCTTAGA GCATGACGAT GCTAACCGAG CTCTTATGGG ATCGAACATG CAACGGCAGG CTGTGCCTTT ATTGAAAACG GAGGCTGCTA TTGTCGGAAC TGGATTAGAA GGACGTGCAG CTAAGGATTC TGGAGCTATT GTTGTTGCTC AAGAAGATGG GGTTGTTGAA TATGTCGACA GTTACGAGAT TGTTGTAGCG AAGAAAAATA ACCCAACGCT GAAAGATACA TATCCACTTA AAAAGTTCTT AAGATCTAAC TCTGGAACAT GCATCAACCA GACTCCGTTA TGTTCTGTCG GAGATGTAGT GACACATGGG GATGTTTTGG CTGATGGACC TGCAACGGAT AAAGGAGAAC TTGCACTTGG TAAAAACGTG CTAGTAGCCT TTATGCCTTG GTATGGGTAC AACTTCGAAG ATGCGATTAT CATCTCTGAA AAATTAATCA AACAGGATGC CTATACTTCT ATCTACATAG AAGAGTTTGA ACTGACAGCC CGAGATACTA AACTTGGTAA AGAAGAAATC ACAAGAGACA TTCCGAATGT TTCTGAGGAA GTTTTAGCAA ATTTAGGAGA AGACGGAATT GTCCGTATTG GTGCTGAAGT TAAGCCTGGG GATATTCTTG TTGGTAAAAT CACTCCAAAA TCTGAAACTG AGTTAGCTCC TGAAGAACGC TTATTGCGAG CTATTTTTGG TGAAAAAGCT GCTGATGTTA AAGATGCTTC TTTAACGGTT CCTCCTGGTA CAGAAGGGGT CGTGATGGAT GTTAAAGTCT TCAGTAGAAA AGATCGCTTG TCTAAGAGTG ATGATGAACT GGTTGAAGAG GCTGTGCATC TTAAAGACTT GCAAAAAGAG TATAAGAGCC AGCTTGCTCA GTTGAAGATG GAACATAGAG AGAAGTTGGG AGCTTTATTG CTTAATGAGA AAGCTCCTGC GGCAATCATT CATCGACGCT CTGCAGATAT TTTAGTGCAG GAAGGGGCTG TTTTTGATCA AGAAACTATA GAGCTTTTAG AAAGAGAGTC TTTAGTTGAT CTCCTAATGG CTCCTTGTGA TATGTACGAT GTTTTGAAAG ACATTCTTTC TAACTATGAA ACAGCTGTTC AGCGTTTGGA AGTAAATTAC AAGACAGAGG CTGAACACAT AAAAGAGGGT GATGCCGATT TAGACCACGG GGTAATCCGA CAAGTTAAGG TCTATGTAGC CTCCAAACGA AAATTACAAG TTGGGGATAA AATGGCTGGA CGTCACGGAA ACAAAGGGGT TGTTTCCAAG ATTGTTCCTG AAGCGGATAT GCCCTTCTTG GCGAATGGAG AGACGGTACA GATGATCTTG AACCCATTAG GGGTGCCTTC TCGAATGAAC CTTGGACAGG TTTTGGAAAC GCATCTGGGA TATGCTGCAA AAACAGCAGG TATCTATGTT AAGACTCCTG TCTTTGAAGG GTTCCCTGAA TCGCGTATTT GGGACATGAT GATCGAGCAA GGCTTACCTG AAGATGGTAA ATCCTACTTA TTCGATGGTA AGACTGGAGA GCGTTTCGAC AGTAAAGTGG TTGTTGGATA CATCTATATG TTGAAATTGA GCCACCTGAT TGCAGATAAG ATCCATGCTC GTTCGATAGG ACCTTACTCT CTCGTTACCC AACAGCCTCT CGGAGGAAAA GCTCAGATGG GAGGACAAAG ATTCGGGGAG ATGGAAGTTT GGGCCTTGGA GGCATATGGA GTAGCTCATA TGTTACAAGA GATCCTAACC GTGAAATCTG ACGATGTTTC GGGAAGAACT CGTATCTATG AGTCAATCGT TAAAGGAGAA AACTTACTTC GTTCTGGAAC GCCTGAGTCG TTCAATGTTT TGATTAAAGA AATGCAAGGT CTAGGGCTCG ATGTTCGCCC TATGGTAGTA GATGCTTAA
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Protein sequence | MFKCPERVSI KKKEDILDLP NLVEVQIKSY KQFLQIGKLA EERENIGLEE VFREIFPIKS YNEATILEYL SYNLGVPKYS PEECIRRGIT YSVTLKVRFR LTDETGIKEE EVYMGTIPIM TDKGTFIING AERVVVSQVH RSPGINFEQE KHSKGNVLFS FRIIPYRGSW LEASFDINDL IYIHIDRKKR RRKILAMTFI RALGYSTDAD IIEEFFAVEE HSLRSEKDFV ALVGKVLADN VVDADSSLVY GKAGEKLSTA MLKRILDAGV QSLKIAVGAD ENHPIIKMLA KDPTDSYEAA LKDFYRRLRP GEPATLANAR STIMRLFFDS KRYNLGRVGR YKLNKKLGFP LDDETLSQVT LRKEDVIGAL KYLIRLRMGD EKTSIDDIDH LANRRVRSVG ELIQNHCRSG LARMEKIVRE RMNLFDFSSD TLTPGKIISA KGLVSVLKDF FSRSQLSQFM DQTNPVAELT HKRRLSALGP GGLNRERAGF EVRDVHSSHY GRICPIETPE GPNIGLITSL SSFAKINEFG FIETPYRVVR DGIVTDEIEY MTADVEEDCV IAQASAELDE YNMFKDSVCW ARYKGEAFEA DTSTVTHMDV SPKQLVSVVT GLIPFLEHDD ANRALMGSNM QRQAVPLLKT EAAIVGTGLE GRAAKDSGAI VVAQEDGVVE YVDSYEIVVA KKNNPTLKDT YPLKKFLRSN SGTCINQTPL CSVGDVVTHG DVLADGPATD KGELALGKNV LVAFMPWYGY NFEDAIIISE KLIKQDAYTS IYIEEFELTA RDTKLGKEEI TRDIPNVSEE VLANLGEDGI VRIGAEVKPG DILVGKITPK SETELAPEER LLRAIFGEKA ADVKDASLTV PPGTEGVVMD VKVFSRKDRL SKSDDELVEE AVHLKDLQKE YKSQLAQLKM EHREKLGALL LNEKAPAAII HRRSADILVQ EGAVFDQETI ELLERESLVD LLMAPCDMYD VLKDILSNYE TAVQRLEVNY KTEAEHIKEG DADLDHGVIR QVKVYVASKR KLQVGDKMAG RHGNKGVVSK IVPEADMPFL ANGETVQMIL NPLGVPSRMN LGQVLETHLG YAAKTAGIYV KTPVFEGFPE SRIWDMMIEQ GLPEDGKSYL FDGKTGERFD SKVVVGYIYM LKLSHLIADK IHARSIGPYS LVTQQPLGGK AQMGGQRFGE MEVWALEAYG VAHMLQEILT VKSDDVSGRT RIYESIVKGE NLLRSGTPES FNVLIKEMQG LGLDVRPMVV DA
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