| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0589 |
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| Symbol | rpoB |
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| ID | 1245948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlamydia muridarum Nigg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002620 |
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| Strand | - |
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| Start bp | 705075 |
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| End bp | 708833 |
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| Gene Length | 3759 bp |
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| Protein Length | 1252 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637061394 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | NP_296965 |
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| Protein GI | 15835206 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAGT GCCCGGAGCG GGTCAGCATC AAAAAGAAAG AAGATATTTT AGATCTTCCT
AATCTTGTCG AAGTTCAAAT CAAGTCGTAT AAGCAGTTTC TTCAAATTGG GAAGCTAGCT
GAAGAGCGAG AAAACATTGG TTTAGAAGAA GTCTTCAGAG AAATTTTCCC TATCAAATCA
TACAATGAAG CTACGATTTT AGAGTACCTC TCTTATAACT TAGGAGTGCC CAAATACTCC
CCAGAAGAGT GTATTCGTCG GGGAATTACT TATAGCGTTA CCTTAAAGGT TCGTTTCCGT
TTGACTGATG AAACGGGAAT TAAGGAAGAA GAAGTCTATA TGGGAACTAT TCCTATTATG
ACTGACAAGG GAACCTTTAT TATCAATGGA GCAGAAAGGG TCGTTGTTTC TCAAGTTCAC
CGTTCTCCAG GGATTAACTT TGAGCAGGAG AAACATTCTA AAGGGAATGT TTTGTTCTCT
TTTAGAATTA TTCCTTATCG AGGAAGTTGG TTAGAGGCTT CTTTTGATAT TAATGACCTC
ATCTATATTC ACATTGATAG GAAAAAACGT CGTAGAAAGA TTTTAGCTAT GACGTTTATT
CGAGCATTGG GGTATTCGAC AGATGCTGAT ATTATCGAAG AATTTTTCGC TGTAGAAGAG
CACTCTCTGC GTTCAGAAAA AGATTTTGTT GCTTTAGTTG GTAAAGTTTT AGCAGACAAT
GTAGTAGATG CGGATTCTTC GTTAGTTTAC GGGAAGGCTG GAGAGAAACT CAGTACTGCT
ATGCTGAAGC GCATTTTGGA TGCTGGGGTA CAATCTTTAA AAATTGCCGT TGGAGCTGAT
GAAAATCATC CAATTATCAA GATGTTGGCA AAAGATCCTA CAGATTCTTA CGAAGCTGCT
CTTAAAGATT TTTACCGCAG ATTGCGTCCA GGTGAGCCAG CAACTTTAGC TAATGCTCGT
TCTACGATTA TGCGTCTATT TTTCGATTCT AAACGTTATA ATTTAGGTCG TGTTGGACGT
TATAAATTAA ATAAAAAATT AGGGTTCCCT CTAGATGACG AAACACTGTC TCAAGTGACT
TTGAGAAAAG AAGATGTTAT TGGAGCTCTA AAGTATCTAA TTCGTTTGCG AATGGGTGAT
GAGAAGACGT CTATCGATGA TATCGACCAT TTGGCAAACC GACGTGTCCG TTCTGTTGGA
GAATTAATTC AGAATCATTG CCGATCAGGA TTGGCTAGAA TGGAAAAAAT CGTTCGAGAA
AGAATGAATC TCTTCGATTT TTCTTCCGAT ACGTTAACTC CTGGAAAAAT TATTTCTGCC
AAAGGGCTAG TTAGTGTCTT GAAAGATTTC TTTAGCCGTT CCCAGTTGTC CCAATTTATG
GATCAAACGA ATCCTGTTGC GGAATTGACA CATAAGCGTC GATTATCTGC ATTAGGACCT
GGAGGATTGA ATAGGGAAAG AGCCGGTTTT GAAGTTCGAG ACGTTCATTC CAGCCACTAT
GGTAGAATTT GTCCAATTGA AACTCCAGAA GGACCAAACA TTGGATTGAT CACTTCCTTG
TCCTCTTTTG CTAAGATCAA TGAATTTGGC TTTATTGAGA CTCCTTATCG CGTTGTGCGT
GATGGCATCG TAACAGATGA AATTGAGTAC ATGACTGCTG ATGTTGAAGA GGATTGTGTC
ATCGCTCAGG CATCTGCGGA GCTTGATGAA TATAACATGT TTAAGGATTC TGTATGTTGG
GCTCGGTATA AAGGAGAAGC TTTTGAAGCG GATACGAGTA CGGTCACACA TATGGACGTC
TCTCCTAAAC AATTGGTGTC TGTAGTTACC GGGCTTATTC CTTTCTTAGA GCATGACGAT
GCTAACCGAG CTCTTATGGG ATCGAACATG CAACGGCAGG CTGTGCCTTT ATTGAAAACG
GAGGCTGCTA TTGTCGGAAC TGGATTAGAA GGACGTGCAG CTAAGGATTC TGGAGCTATT
GTTGTTGCTC AAGAAGATGG GGTTGTTGAA TATGTCGACA GTTACGAGAT TGTTGTAGCG
AAGAAAAATA ACCCAACGCT GAAAGATACA TATCCACTTA AAAAGTTCTT AAGATCTAAC
TCTGGAACAT GCATCAACCA GACTCCGTTA TGTTCTGTCG GAGATGTAGT GACACATGGG
GATGTTTTGG CTGATGGACC TGCAACGGAT AAAGGAGAAC TTGCACTTGG TAAAAACGTG
CTAGTAGCCT TTATGCCTTG GTATGGGTAC AACTTCGAAG ATGCGATTAT CATCTCTGAA
AAATTAATCA AACAGGATGC CTATACTTCT ATCTACATAG AAGAGTTTGA ACTGACAGCC
CGAGATACTA AACTTGGTAA AGAAGAAATC ACAAGAGACA TTCCGAATGT TTCTGAGGAA
GTTTTAGCAA ATTTAGGAGA AGACGGAATT GTCCGTATTG GTGCTGAAGT TAAGCCTGGG
GATATTCTTG TTGGTAAAAT CACTCCAAAA TCTGAAACTG AGTTAGCTCC TGAAGAACGC
TTATTGCGAG CTATTTTTGG TGAAAAAGCT GCTGATGTTA AAGATGCTTC TTTAACGGTT
CCTCCTGGTA CAGAAGGGGT CGTGATGGAT GTTAAAGTCT TCAGTAGAAA AGATCGCTTG
TCTAAGAGTG ATGATGAACT GGTTGAAGAG GCTGTGCATC TTAAAGACTT GCAAAAAGAG
TATAAGAGCC AGCTTGCTCA GTTGAAGATG GAACATAGAG AGAAGTTGGG AGCTTTATTG
CTTAATGAGA AAGCTCCTGC GGCAATCATT CATCGACGCT CTGCAGATAT TTTAGTGCAG
GAAGGGGCTG TTTTTGATCA AGAAACTATA GAGCTTTTAG AAAGAGAGTC TTTAGTTGAT
CTCCTAATGG CTCCTTGTGA TATGTACGAT GTTTTGAAAG ACATTCTTTC TAACTATGAA
ACAGCTGTTC AGCGTTTGGA AGTAAATTAC AAGACAGAGG CTGAACACAT AAAAGAGGGT
GATGCCGATT TAGACCACGG GGTAATCCGA CAAGTTAAGG TCTATGTAGC CTCCAAACGA
AAATTACAAG TTGGGGATAA AATGGCTGGA CGTCACGGAA ACAAAGGGGT TGTTTCCAAG
ATTGTTCCTG AAGCGGATAT GCCCTTCTTG GCGAATGGAG AGACGGTACA GATGATCTTG
AACCCATTAG GGGTGCCTTC TCGAATGAAC CTTGGACAGG TTTTGGAAAC GCATCTGGGA
TATGCTGCAA AAACAGCAGG TATCTATGTT AAGACTCCTG TCTTTGAAGG GTTCCCTGAA
TCGCGTATTT GGGACATGAT GATCGAGCAA GGCTTACCTG AAGATGGTAA ATCCTACTTA
TTCGATGGTA AGACTGGAGA GCGTTTCGAC AGTAAAGTGG TTGTTGGATA CATCTATATG
TTGAAATTGA GCCACCTGAT TGCAGATAAG ATCCATGCTC GTTCGATAGG ACCTTACTCT
CTCGTTACCC AACAGCCTCT CGGAGGAAAA GCTCAGATGG GAGGACAAAG ATTCGGGGAG
ATGGAAGTTT GGGCCTTGGA GGCATATGGA GTAGCTCATA TGTTACAAGA GATCCTAACC
GTGAAATCTG ACGATGTTTC GGGAAGAACT CGTATCTATG AGTCAATCGT TAAAGGAGAA
AACTTACTTC GTTCTGGAAC GCCTGAGTCG TTCAATGTTT TGATTAAAGA AATGCAAGGT
CTAGGGCTCG ATGTTCGCCC TATGGTAGTA GATGCTTAA
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| Protein sequence | MFKCPERVSI KKKEDILDLP NLVEVQIKSY KQFLQIGKLA EERENIGLEE VFREIFPIKS
YNEATILEYL SYNLGVPKYS PEECIRRGIT YSVTLKVRFR LTDETGIKEE EVYMGTIPIM
TDKGTFIING AERVVVSQVH RSPGINFEQE KHSKGNVLFS FRIIPYRGSW LEASFDINDL
IYIHIDRKKR RRKILAMTFI RALGYSTDAD IIEEFFAVEE HSLRSEKDFV ALVGKVLADN
VVDADSSLVY GKAGEKLSTA MLKRILDAGV QSLKIAVGAD ENHPIIKMLA KDPTDSYEAA
LKDFYRRLRP GEPATLANAR STIMRLFFDS KRYNLGRVGR YKLNKKLGFP LDDETLSQVT
LRKEDVIGAL KYLIRLRMGD EKTSIDDIDH LANRRVRSVG ELIQNHCRSG LARMEKIVRE
RMNLFDFSSD TLTPGKIISA KGLVSVLKDF FSRSQLSQFM DQTNPVAELT HKRRLSALGP
GGLNRERAGF EVRDVHSSHY GRICPIETPE GPNIGLITSL SSFAKINEFG FIETPYRVVR
DGIVTDEIEY MTADVEEDCV IAQASAELDE YNMFKDSVCW ARYKGEAFEA DTSTVTHMDV
SPKQLVSVVT GLIPFLEHDD ANRALMGSNM QRQAVPLLKT EAAIVGTGLE GRAAKDSGAI
VVAQEDGVVE YVDSYEIVVA KKNNPTLKDT YPLKKFLRSN SGTCINQTPL CSVGDVVTHG
DVLADGPATD KGELALGKNV LVAFMPWYGY NFEDAIIISE KLIKQDAYTS IYIEEFELTA
RDTKLGKEEI TRDIPNVSEE VLANLGEDGI VRIGAEVKPG DILVGKITPK SETELAPEER
LLRAIFGEKA ADVKDASLTV PPGTEGVVMD VKVFSRKDRL SKSDDELVEE AVHLKDLQKE
YKSQLAQLKM EHREKLGALL LNEKAPAAII HRRSADILVQ EGAVFDQETI ELLERESLVD
LLMAPCDMYD VLKDILSNYE TAVQRLEVNY KTEAEHIKEG DADLDHGVIR QVKVYVASKR
KLQVGDKMAG RHGNKGVVSK IVPEADMPFL ANGETVQMIL NPLGVPSRMN LGQVLETHLG
YAAKTAGIYV KTPVFEGFPE SRIWDMMIEQ GLPEDGKSYL FDGKTGERFD SKVVVGYIYM
LKLSHLIADK IHARSIGPYS LVTQQPLGGK AQMGGQRFGE MEVWALEAYG VAHMLQEILT
VKSDDVSGRT RIYESIVKGE NLLRSGTPES FNVLIKEMQG LGLDVRPMVV DA
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