| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0563 |
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| Symbol | |
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| ID | 1245922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlamydia muridarum Nigg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002620 |
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| Strand | - |
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| Start bp | 674863 |
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| End bp | 675534 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637061368 |
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| Product | PTS system, IIA component |
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| Protein accession | NP_296939 |
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| Protein GI | 15835180 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.11237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATTTGC GATTAGATGA ATTAGCTGTA TTATTGGACG TTGCGGAAGA TTCTATTCGG
CAATGGGTGT CTTTCGAGGG GATTCCTAGT TACAAAATCA ATGATGAATT GCGCTTTAAT
AGAGAAGAAG TTGAGGACTG GCTCATCCAT AATCACGGGG TTATTGTGGC TGAGAAGGAT
AAGAGGGAAT CTAAAGATTT GTCTCTTAGA TACAGTCTTT ACCGAGCTAT TTACCGAGGA
GGGGTCCTTA AAAACGTCCT TGTAGATAGT AAAGAAGAAG CCTTACAGCA TACAGCTAAG
TATATAGCTA ATAAGTTTGA GTTGGATTCT GGAGTACTCT TCGAAATGCT TATGCATCGG
GAGAGCCTTA TGTCTACCGG TATTGGAGAG GGGATTGCTT TGCCTCATGC CAAAGATTTT
TTGATTAATA TTGGATATGA CATTGTTGTT CCTGTTTTCT TATCCCAGAG CATTGAATAC
GGGGCTTTGG ATGGTAAGCC TGTTGATACT ATGTTTTTTC TCTTTGCAAA CCAAGATAGA
CATCATCTGA ATTTAGTGAA TAAAATTGTG CATTTGGGAA TGTCTTTAGA AGCTCGTCTT
TTTCTTAAGG AACACCCGGA TCAGCCGCAG CTTTTAGCTT TTATTAAGAA TTGGGAAGCT
CGAATTCATT AA
|
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| Protein sequence | MDLRLDELAV LLDVAEDSIR QWVSFEGIPS YKINDELRFN REEVEDWLIH NHGVIVAEKD
KRESKDLSLR YSLYRAIYRG GVLKNVLVDS KEEALQHTAK YIANKFELDS GVLFEMLMHR
ESLMSTGIGE GIALPHAKDF LINIGYDIVV PVFLSQSIEY GALDGKPVDT MFFLFANQDR
HHLNLVNKIV HLGMSLEARL FLKEHPDQPQ LLAFIKNWEA RIH
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