Gene TC0470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTC0470 
Symbol 
ID1245825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlamydia muridarum Nigg 
KingdomBacteria 
Replicon accessionNC_002620 
Strand
Start bp570066 
End bp571088 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content44% 
IMG OID637061272 
Productputative DNA-binding/iron metalloprotein/AP endonuclease 
Protein accessionNP_296847 
Protein GI15835088 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAACAC TAGGCTTAGA AAGCTCTTGC GATGAAACCT CTTGTGCTCT TGTCGAGAAT 
GGAAAAATCC TTGCAAATAG GATAGCATCT CAGGACATTC ATGCGGCTTA TGGAGGCGTA
ATCCCTGAGC TAGCTTCCCG TGCACATCTA CAAATATTCC CAAAACTTTT GGCCGCTGTA
GCTCAAGATG CCGAAGTTTC TTTAGAAGAT GTCGAATTAA TTTCTGTAGC CAATACCCCC
GGCCTTATTG GCGCGCTTTC TGTTGGCGTT AACTTCGCAA AGGGACTAGC TAGCGGGTTA
AAAAAAACTC TTATAGGAGT CAACCATGTA GAGGCACATT TATATGCTGC CTGCTTGGAA
GAACCTTCCA TTCGCTTCCC CGCTCTAGGC CTAGCTATTT CGGGAGCACA CACTTCTTTA
TTCTTAATGC CTAATGCCAC AACCTTCCTT TTAATAGGCA AAACTCGAGA TGATGCTATA
GGAGAAACTT TTGATAAAGT AGCTCGATTC CTTGGGCTCC CCTATCCAGG AGGACAAAAA
TTAGAGGAAT TGGCTCAAGA TGGCGATGAA GAAGCTTACC CCTTTTCACG AGCCAAAGTT
TCTGGAAACG ATTTCTCTTT TAGTGGATTA AAAACCGCCG TATTATATGC CTTGAAAGGT
AACAATAGCT CGGCCAAAGC ACCTTTCCCA GAAGTCTCTG AAACGCAAAA ACGAAACATC
GCTGCATCTT TCCAAAAAGC AGCTTTCATG ACTATTGCTC AAAAACTTCC TGATATTGTA
AAAGCGTTTT CTTGCGAGTC TTTGATTGTT GGTGGGGGCG TAGCAAACAA CCGTTACTTC
CGTCGCCTGC TGAATCAAAC GTGCTCTCTT CCTACATATT TCCCTTCTTC GCAGTTGTGC
TCTGATAATG CTGCAATGAT AGCTGGATTA GGAGAGAGAC TGTTTTGCAA TCAGACATAT
GTTTCTAAGG AGGTTATTCC ATGCGCAAGG TATCAGTGGG AATCTGCTTG CTTATCGCAT
TAG
 
Protein sequence
MLTLGLESSC DETSCALVEN GKILANRIAS QDIHAAYGGV IPELASRAHL QIFPKLLAAV 
AQDAEVSLED VELISVANTP GLIGALSVGV NFAKGLASGL KKTLIGVNHV EAHLYAACLE
EPSIRFPALG LAISGAHTSL FLMPNATTFL LIGKTRDDAI GETFDKVARF LGLPYPGGQK
LEELAQDGDE EAYPFSRAKV SGNDFSFSGL KTAVLYALKG NNSSAKAPFP EVSETQKRNI
AASFQKAAFM TIAQKLPDIV KAFSCESLIV GGGVANNRYF RRLLNQTCSL PTYFPSSQLC
SDNAAMIAGL GERLFCNQTY VSKEVIPCAR YQWESACLSH