Gene TC0422 details

Gene Information

• Locus tag: TC0422
• ID: 1245775
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: +
• Start bp: 482348
• End bp: 484192
• Gene Length: 1845 bp
• Protein Length: 614 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637061222
• Product: hypothetical protein
• Protein accession: NP_296799
• Protein GI: 15835040
• COG category: [K] Transcription; [L] Replication, recombination and repair; [R] General function prediction only; [S] Function unknown; [T] Signal transduction mechanisms
• COG ID: [COG0515] Serine/threonine protein kinase; [COG1262] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.385064
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGAGC AATCCACAGT TGAATATTGG GGAGATTACA AAGTTATCGC GGAACTCGAG 
CAAGGATTGT GGAGTCGAGA TGTTCTTACA GAACATCGGT TTATTAAAAA ACGTTACGTG 
CTCAAGATAC TTCCTTCGGA ACTTTCATTG TCAGAAGATT TTATGAAAGT GTTTCAAAAG 
GTCATTGTTC AATTAGCTAC GATTCGCCAT CCAAGCTTGG TAGCTATTGA GAATGTTTCT 
CAGGAGAAGG ATCGCTATTT TATTGTGACG GAAGAGAATA GCGGTACGAT CTCTCTGGCC 
AAGTATTTAT CTGGAAGAAA ACTATCAGAA GAAGAGATTG TGTATTTGAT TCAACAACTT 
TGTGAAGTTT TGGAGCTAGT ACATGAAATA GGATTAGCTC ATGGTCAGAT TAATTTACAT 
TCTGTTCATG TCTCTTTTAT CAATGGAGTA GCCAATATTT ATCTTCCTGA GGTGGGGTTC 
GCATCTTTGC TTAGAGAACG TATGTTCTCC TCTATTATGC AGAAAGCTTC CATGCAAGAA 
AGCGTGGAAT GTATTCGTGA TTTGTTGGTG TTTGAGGCTC CTGAAGAGAA ATCAACCAAT 
CACCGTGCGA CAGATGCGTA CTCAGTTGGT GTGTTAGCTT ATTACTTGCT AGTAGGAGCA 
TTTCCTTGGG GAGCTTTTCC TAAACCCTCG TCTTGTATAC CTGACAGTAT TTATGATTGG 
GATAGTTTTA TTTTGAGTTG TTTGCAGCAA CAACAACAAG CCAGACCGAA GCGATTGCGA 
GATGCTCTAA AGAAAAAAAC ATTAGGAGAG CAGCTCCAGT CGACTATTGA CCACTGTCGT 
GAGTCCTTGC GTGCGATGGA AGTTCAAGAG GAGGTTTCGG AACCTATTGC TCCGACGTCT 
CTGATTCGAG AGGGAGAGAA GCTTTTTGAG GGCAAAGAGG AACAACAAGC TTTTGTATTA 
GTAGAGGCTA AATCGATTGA TGAAGCAATG GTTACTACTG TGGATTCAGA GGAAGTATCG 
GAGAGTGGAG AAGGATATGT CAATCCGTTG CAGTCTTTAT TAGCAAGAGA ACCGGTCGTT 
AGTCGCTACG TAGAAATAGA AAGAGAAGAA GTGAAACCTC AACCGCTATC TACCGAAATG 
GTGTTTATTG AGGGAGGAGA TTTTTCTCGT GGAAGCAGAG ATGGACAGAG GGATGAATTA 
CCGGTTCATA ATATCACCCT TCCGGGATTT CTTTTAGATA TTCATCCTGT TACGAATGAG 
CATTTTGTAC GTTTTTTGGA GTTTATTGGC GGAGAACAGG ACGAACATTA TAATGAACTA 
ATTCGTTTAA AAGATTCTAG GATTCAGCGT CGCTCAGGCA GGCTTATTAT TGAGCCTGGA 
TATGCTAAAC ATCCTGTTGT GGGTGTGACT TGGTATGGTG CTTCTTCTTA TGCAAGTTGG 
ATAGGCAAGA GGTTGCCTTC GGAGGCTGAA TGGGAAGTGG CGGCTGCCGG AGGGAAGTTA 
GGAATGCGTT ACCCTACCGG AGAAGATGTA GATAAAAGCA AAGCTAACTT CTTTAGTTCA 
GATACAACGC CGGTTATGAG CTATCCAGCT AATATACTAG GTCTTTATGA TATGGCAGGG 
AATATATACG AATGGTGCCA GGATTGGTAC AGTTACGATT TTTATGAAAA TTCCGCTTTA 
GAGCCAGATT CTCCTCAGGG GCCTCCTCAA GGTGTCTATC GCGTTTTGCG AGGAGGGTGT 
TGGAAGAGTC TAAAAGAGGA TCTCCGTTGT GCACATCGCC ACCGAAACAA TCCAGGGGCA 
ATTAATAGCA CCTATGGGTT TCGTTGTGCG AAAGATGTAA AATAA 

 

Protein sequence

MEEQSTVEYW GDYKVIAELE QGLWSRDVLT EHRFIKKRYV LKILPSELSL SEDFMKVFQK 
VIVQLATIRH PSLVAIENVS QEKDRYFIVT EENSGTISLA KYLSGRKLSE EEIVYLIQQL 
CEVLELVHEI GLAHGQINLH SVHVSFINGV ANIYLPEVGF ASLLRERMFS SIMQKASMQE 
SVECIRDLLV FEAPEEKSTN HRATDAYSVG VLAYYLLVGA FPWGAFPKPS SCIPDSIYDW 
DSFILSCLQQ QQQARPKRLR DALKKKTLGE QLQSTIDHCR ESLRAMEVQE EVSEPIAPTS 
LIREGEKLFE GKEEQQAFVL VEAKSIDEAM VTTVDSEEVS ESGEGYVNPL QSLLAREPVV 
SRYVEIEREE VKPQPLSTEM VFIEGGDFSR GSRDGQRDEL PVHNITLPGF LLDIHPVTNE 
HFVRFLEFIG GEQDEHYNEL IRLKDSRIQR RSGRLIIEPG YAKHPVVGVT WYGASSYASW 
IGKRLPSEAE WEVAAAGGKL GMRYPTGEDV DKSKANFFSS DTTPVMSYPA NILGLYDMAG 
NIYEWCQDWY SYDFYENSAL EPDSPQGPPQ GVYRVLRGGC WKSLKEDLRC AHRHRNNPGA 
INSTYGFRCA KDVK