| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0409 |
|---|
| Symbol | |
|---|
| ID | 1245760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlamydia muridarum Nigg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002620 |
|---|
| Strand | - |
|---|
| Start bp | 469767 |
|---|
| End bp | 471044 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637061207 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_296786 |
|---|
| Protein GI | 15835027 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1295] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.521207 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCGCC CTTTGTCTTT TCTTAAAAAG CTTCACCATG CCTTTCGCAA CAATTTCATT
ATCAAATCTT TTCTAAAAGC TCCTAAAGTT CTTTACTACA ATGAGGCCTC TAAAGAAGCC
TGCATTCTAA GTTACTATGG TCTTTTTAGT TGCATTCCTA TACTGGTCTT CTTTCTAAGA
CTTTCTCAAT ATTTGTTCAT TAGCTTGGAC TGGAAAGAAT GGCTATTGCT CCATTACCCT
GATTACGAAA CTCCTATTCT AGCTATTTTT GAAGCAGCTT ATTCAACAAC AAGCAGCATC
GTAGTCGTTC TGGTCAGTAG TTTTTTTGTT TTTTGTTGGG CTGGAATTCT CATGCTGCAA
TCTTTAGAAG ATGGCCTGAA TAAAATATTC TGCCCAGGAA TCACACAAGC CTCTTTAAAA
AGACTCATTA GCTACTTAAT TATTACCCTT ATTAGCCCCA TGATCTTCAT CATTGTTTGC
GGATCTTGGA TCTATATCAC ACAAATCATG CCTATTAGTT ACCCCAAGCT ATTTAGTTTT
AGCCATGCCA TGGCCTGCAT TTATGTGATT TCGCGAATAC TACCTTATGC CCTACTTTAT
GGTGGCCTGT TTTGCTGCTA TGCATTTCTC CCCAGAGTTC CCACACAAAA ATCCTCGTCT
CTTTTGGCCG CAGCCATAGC TGGTAGTGCC TGGGTAATCT CTCAGAAAAT TTTCTTTTGC
CTGCAACTCT ATATTTTCAA CTATAGCTTT ACTTATGGAG CCCTAGTTGC TTTACCCTCC
TTCCTCCTTC TTCTCTATCT TTACTCTATT ATTTATTTGT TCGGAGGAGC ATTGTCCTTC
CTCTTTCAAA ATAAAGGATT TATCACTCTA ATTCCGAAAG AGGAGATTTT TCCTAATAGC
TACTTCAAAT TCATTTTATG TCTGTATTTT CTGACTCTTA TTACAGAGCA TTTCGATCAC
TCCCTCCCCC CTCCAAGCTC CAGTTACCTT GCTAAAAGAG CTAAAGCTTC TATTGGAGAA
GCTTCCCAAT GTCTAGATAT CCTAGAAAAA GAGGGTATGA TCCTAAAACA CAAAGACGGT
TATAAGCCCT CCCATAACAT TTCTAACTTG CATATAGATG CTATCTTTGT CCTTTTAACA
AAATCTCCCT CGTTCGCGAA CATCTGCTCT TCCTCTCTAA TGCCTATACA AGAAAACCTT
GCTCATATAC TAGCAGAGAT CAAAAAGAGC TCGCATAACC TCTCTCTTTC AGAAATTGCT
AAAAAAGTGA ATTCATGA
|
|---|
| Protein sequence | MLRPLSFLKK LHHAFRNNFI IKSFLKAPKV LYYNEASKEA CILSYYGLFS CIPILVFFLR
LSQYLFISLD WKEWLLLHYP DYETPILAIF EAAYSTTSSI VVVLVSSFFV FCWAGILMLQ
SLEDGLNKIF CPGITQASLK RLISYLIITL ISPMIFIIVC GSWIYITQIM PISYPKLFSF
SHAMACIYVI SRILPYALLY GGLFCCYAFL PRVPTQKSSS LLAAAIAGSA WVISQKIFFC
LQLYIFNYSF TYGALVALPS FLLLLYLYSI IYLFGGALSF LFQNKGFITL IPKEEIFPNS
YFKFILCLYF LTLITEHFDH SLPPPSSSYL AKRAKASIGE ASQCLDILEK EGMILKHKDG
YKPSHNISNL HIDAIFVLLT KSPSFANICS SSLMPIQENL AHILAEIKKS SHNLSLSEIA
KKVNS
|
|---|
| |