Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TC0403 |
Symbol | |
ID | 1245755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlamydia muridarum Nigg |
Kingdom | Bacteria |
Replicon accession | NC_002620 |
Strand | - |
Start bp | 463114 |
End bp | 463959 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637061202 |
Product | Nlp/P60 family protein |
Protein accession | NP_296781 |
Protein GI | 15835022 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000865774 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCTATG CCTTGCTTTC CCCTGTTTGT GATCTATTAT CAAATTCCGA AGGCATAGAA ACTCAAATTT TGTTTGGAGA AAGGATAGGT AAGTACAATA ATCGGTTCTA TGCTTATTCC CAGCTATTCT TTTCTTCCTC CTGGCAGCCT TATCCAGGAG ATTCCCTTAA AAAGATCCCC CTTTTGGCTC CTCAAATCTC TACTCCTAAT GCTGTTGTTT GCTCTCAGGA AGCTTTCTTA GAACCCTGGC ACATCCCGAT ACCATTTGCA TCCCCACTTC ACATAAATAG TTCGAATCAA GTATCTCTAT CCTCTGATGG CATAGCATTA TTAAATTTTT TTTATAAAAG TAATCATCCA AAAGGGTTTT GTCTTACTAA AAACTTTCAG TTCTTAGACC ATCCCCTCTC TTCAAATGAT CTAGTAGACT TTGCGGAACA GCTTATAAAA ACTCCCTATG TTTGGGGTGG AAGATGCATT CACAAACAAC TCCCCCATAA TGGAGTAGAC TGCTCAGGCT TTGTTCAACT GCTTTATCAA GCAACTGGAA GAAATATCCC TCGCAACGCT AGAGACCAGT ATAAAGATTG CTTGTCGATA AAAAATTTCT TTTCCTTACC TATAGGAGGA CTGATCTTTC TTAAAAAAGA GACCACGGGA CAGATTAACC ACGTCATGAT AAAAACCGCA GAAAACCAAT TCATGCACGC CTCAGAAAAA AAAGGGATGG TGGAAAAAGT CATCTTAGGA GAAGACTCTT TCTTCAAGAG AAATACGTTT TATTTTGAAA ATCAGACCCG AGAAGCTGTA TTTGGGATGC CGAAAAACAG AAAAGCCTTC TTTTAA
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Protein sequence | MFYALLSPVC DLLSNSEGIE TQILFGERIG KYNNRFYAYS QLFFSSSWQP YPGDSLKKIP LLAPQISTPN AVVCSQEAFL EPWHIPIPFA SPLHINSSNQ VSLSSDGIAL LNFFYKSNHP KGFCLTKNFQ FLDHPLSSND LVDFAEQLIK TPYVWGGRCI HKQLPHNGVD CSGFVQLLYQ ATGRNIPRNA RDQYKDCLSI KNFFSLPIGG LIFLKKETTG QINHVMIKTA ENQFMHASEK KGMVEKVILG EDSFFKRNTF YFENQTREAV FGMPKNRKAF F
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