Gene TC0401 details

Gene Information

• Locus tag: TC0401
• Symbol: rplM
• ID: 1245753
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: +
• Start bp: 462199
• End bp: 462651
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637061200
• Product: 50S ribosomal protein L13
• Protein accession: NP_296779
• Protein GI: 15835020
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.245435
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAA GAAAAGATAC GAAAACGACC CTAGCGAAGG CTTCGGACGA TCAAAACAAA 
GCCTGGTATG TAATTAATGC CGAAGGGAAG ACCTTAGGGA GACTATCTTC AGAAGTCGCG 
AAGATCCTGA GAGGTAAGCA TAAAGTTACT TTCACTCCTC ACGTAGCGAT GGGAGATGGT 
GTCATCGTGA TTAACGCTGA GAAAGTGCGT TTGACTGGCG CAAAAAGAGC TCAGAAGGTG 
TATCACTATT ACACAGGATT TATTTCCGGA ATGCGAGAAG TTCCTTTTGA GAACATGATC 
GCAAGAAAGC CTGCGTATGT TATCGAACAT GCTGTTAAAG GAATGTTGCC TAAAACTAAA 
CTTGGAAGAC GTCAAATGAA GTCTTTGAGA GTTGTGAAAG GTAGTTCTTA CGCACAGTAT 
GAAGCCATCA AACCAATTGT TTTAGACGCG TAA 

 

Protein sequence

MEKRKDTKTT LAKASDDQNK AWYVINAEGK TLGRLSSEVA KILRGKHKVT FTPHVAMGDG 
VIVINAEKVR LTGAKRAQKV YHYYTGFISG MREVPFENMI ARKPAYVIEH AVKGMLPKTK 
LGRRQMKSLR VVKGSSYAQY EAIKPIVLDA