Gene TC0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTC0396 
SymbolincA 
ID1245748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlamydia muridarum Nigg 
KingdomBacteria 
Replicon accessionNC_002620 
Strand
Start bp457696 
End bp458526 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content38% 
IMG OID637061195 
Productinclusion membrane localised protein IncA 
Protein accessionNP_296774 
Protein GI15835015 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCAC CTACTCTAGT TGAGATGCCT CTATCTTGCT ATCCCCCAAC ACATACCAGT 
TCAACAGCCT GCACAAAAAG AAGCTCATCA CTCTATAAGC CCTCATTAAT AGAAACTGTT
CAACGAGTGG CTGCTTTTGT TTCCTTAGCT ATCTTAAGCA TAATAGGCTT TCTGGCTATC
TTAGGGCATG CTATTGGTTT TCTGATAGCT CCACAAGTTG CCCTAGTTCT TATTGCGGTA
TTTATCATTT CCTTATTAGG AAATGCTCTC TACTTATGCA AAACGGCTCC ATTACGTCTA
TACAAAGAGC TTCAACAAGA GGTTGCGTCT CTAAAAGAAG TAAATTTCTT GTTAAAATCT
GTTCAAAAGG AATTTTTAGG GTTATCAAAA GATTTCGCAA CAACCTCCAA AGACCTCTCT
GATGTATCCC TAGATTTTCA TAATCTCCTA CAAGATTTTC AATCTTCCCA TCAAGGGTTT
GAGGACCTAC TGGAGGACTA TAAAAATTCT GCAGAGGATC TTCGTCAAAT TTTTTCTCAA
GAAACCGTGC AGAGTCTCAA AAGTACTATC CTATCATTAA AAGAAGAGAT AAAAGAGATC
GTCCCATTGA CTGAGGAAGT TCGCCGTTTG GCTGAGAATA AAGAAGATTT ACTAAAGATT
GTTCAAGATC TGCAAGATAT TCGAGATAAA TTACGAGCAG AAATCAATAA CCTTTCGCAA
GCCTCCAAAA CATTAAGTGA GCAGATCGCA TCGCAAATAG AAGAAAATGA AAAACTTTAC
GCCAATATAA CAAAAGCGCT CTCTCAATCT TATTCTGATT CTTCCGCCTA A
 
Protein sequence
MTSPTLVEMP LSCYPPTHTS STACTKRSSS LYKPSLIETV QRVAAFVSLA ILSIIGFLAI 
LGHAIGFLIA PQVALVLIAV FIISLLGNAL YLCKTAPLRL YKELQQEVAS LKEVNFLLKS
VQKEFLGLSK DFATTSKDLS DVSLDFHNLL QDFQSSHQGF EDLLEDYKNS AEDLRQIFSQ
ETVQSLKSTI LSLKEEIKEI VPLTEEVRRL AENKEDLLKI VQDLQDIRDK LRAEINNLSQ
ASKTLSEQIA SQIEENEKLY ANITKALSQS YSDSSA