Gene TC0346 details

Gene Information

• Locus tag: TC0346
• Symbol: recF
• ID: 1246389
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: -
• Start bp: 409201
• End bp: 410298
• Gene Length: 1098 bp
• Protein Length: 365 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637061147
• Product: recombination protein F
• Protein accession: NP_296724
• Protein GI: 15834965
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1195] Recombinational DNA repair ATPase (RecF pathway)
• TIGRFAM ID: [TIGR00611] recF protein

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.105676
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGAGTTC ATTCTTTATT TCTTAAAGAT TTCAGAAATT ACTCGGAACT GCGTCTAGAA 
TTAGGACCAG AGATGAATTC TATCTTTGGT CTTAATGCTC AGGGGAAAAC AAATATTCTT 
GAGGCATTGT ATATCTTATC TTTAGGAAGA TCCTTCCGAA CAAGTCGTTT GACTGAGGCT 
ATACGCTTTG GATCGTCTCA TTTTTTTATC GAAGCTGTTT TCTCCCAAAA CCAAGTTTTT 
CATACCCTCT CTATTCAAGT AGATAAACGA GGGAAGAAAA TTCTTTTTGA TGGAGCCCCT 
ATTACTAAGT TGTCCGCACT AGTAGGACTA TTTCCTGTTA TTCTTTTTTC TGTAAAAGAC 
ACAACAATTA TTGAAGGCTC CCCAGCAGAA CGGCGCCGGT TTCTAGATCT CTTATTAGCC 
CAAGCTTCAG AAAAATATAC AGGTCAGATT GCCTTGTATC ACAAAGCTTT GGACCAACGT 
AATGCAGCTA TTAAAACACA AGACTATAAA ACCATCGCTG CCTGGAACTC CCCTCTTATT 
GCTTATGGAA GCCTGGTAGC CTTGTTGCGC TATGAATGCG CTAAAAAACT GCATAAAATT 
TTTCAAAATC TTTGGGATAA CACATTAAAA GAAACTCTTT CTCTTCGTTA TGAGAGTTCT 
CTCATTACAA CAGAGTCTCC TACACTCAAT GACATTGCAA GTAATTACTA TGAACAACTT 
AGATTAGCTA ATACCAAAGA CTTTGAACTT GGCTACACAA CAGTAGGCCC TCATCGAGAT 
GAACTTATCA TCACGCTTAA TGATTTACCT GTTTCTAAAT TCTCTAGTGA AGGCCAAAAA 
CATTCTCTTT TAGCAGTTCT TCGATTTGCT GAATGTGTAT ATCTTCAGGA AGAATTTCTT 
ATCCATCCAC TTCTATGTAT GGATGATATT CACGCTTGTT TAGATCAAAA TCGATTAGAT 
CAGCTCTTCC AACTCTCAAC TTCTTTAGGA CAAACTGTTA CTACTTCCAC CATTTGTCCG 
AATCATCTAG ATTCTAACTC TTCTATTTTT CACGTTACAC AAGCTCAAGT ATCGCTTGTC 
ACTTCCAATT TTTTATAA 

 

Protein sequence

MRVHSLFLKD FRNYSELRLE LGPEMNSIFG LNAQGKTNIL EALYILSLGR SFRTSRLTEA 
IRFGSSHFFI EAVFSQNQVF HTLSIQVDKR GKKILFDGAP ITKLSALVGL FPVILFSVKD 
TTIIEGSPAE RRRFLDLLLA QASEKYTGQI ALYHKALDQR NAAIKTQDYK TIAAWNSPLI 
AYGSLVALLR YECAKKLHKI FQNLWDNTLK ETLSLRYESS LITTESPTLN DIASNYYEQL 
RLANTKDFEL GYTTVGPHRD ELIITLNDLP VSKFSSEGQK HSLLAVLRFA ECVYLQEEFL 
IHPLLCMDDI HACLDQNRLD QLFQLSTSLG QTVTTSTICP NHLDSNSSIF HVTQAQVSLV 
TSNFL