Gene TC0343 details

Gene Information

• Locus tag: TC0343
• Symbol: dxr
• ID: 1246386
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: +
• Start bp: 404923
• End bp: 406062
• Gene Length: 1140 bp
• Protein Length: 379 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637061144
• Product: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
• Protein accession: NP_296721
• Protein GI: 15834962
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase
• TIGRFAM ID: [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000311971
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAGCGAT TAGCTTTAAT TGGCTCAACA GGAAGCATAG GAAAGCAAGT TTTACAGGTA 
ATTCGGGAAA TTCCAGACGC TTTTGTCATA GAAACGCTTG CTGCATATGG ACGTAATAGA 
GAAAGTTTGA TTTCTCAGAT TAGAGAATTT TCGCCGCGAG TAGTAGCTGT TCGTGATGAG 
ACTACTTATA AGGAATTGCG GAAGTTATTT CCTCATATTG AAATCCTTTC AGGAGAAGAA 
GGACTGATTG CTGTCGCTAC TGCGGCTTCT GTAGATATGA CTATTGTAGC TTCTTCTGGA 
ATAGATGCTT TGCCTGCAGT AATGGCTTCT ATTCAAGAGA GAAAGACGAT CGCTTTAGCT 
AATAAAGAGT CTCTAGTAGC TGCTGGAGAG TTAGTTACTA CTTTGGCTAA AAAGAATCAT 
GTACAAATTC TTCCCATTGA CAGCGAACAT AATGCTCTTT TCCAATGTTT GGAAGGTCGA 
GATCCTTCTA CAATAAAAAA ATTAATATTA ACGGCGTCAG GCGGTCCATT AAGAAATAAA 
TCAAAAGAGG AGTTGCAAAA GGTTACTTTA CAAGAGGTCT TAAAGCATCC TATTTGGGAT 
ATGGGGCCTA AAATTACGGT AGATTCTTCT ACTTTAGTGA ATAAAGGATT AGAGATTATA 
GAGGCTTTTT GGTTGTTTGG ATTACAGGCT GTTGAAATTG AAGCTGTGAT ACATCCCCAA 
AGCCTTATTC ATGGCATGGT GGAGTTTTGT GATGGGACAA TCCTTTCAGT GATGAATCCT 
CCTAGTATGC TTTTCCCGAT ACAACATGTT TTAACTTTTC CAGATCGATA TCCCTCGATA 
ATCTCAGGAT TAAATTTTCT TACAAATCAA ACTTTAGAAT TTCTCCCTAT TGATGAYGAA 
AGATTCCCTA GCATTCGGCT AGCAAAGGAT GTGCTTCGTG AGGGTGGCTC TATGGGATGT 
TTTTTCAATG GAGCTAATGA GGCTTTAGTT CAACGATTTC TATCTGGAGA GATTGCTTGG 
TATCAAATTG TCTCTAAATT ACAGACTCTT ATGGATAAAT ATGTGGTGCG ATCCTGTCTA 
TCTTTAGAGG ATATCTTGCA GGTAGACTCA GAAGCTAGAG CTCTTGCTAG CGAGTGCTAA 

 

Protein sequence

MKRLALIGST GSIGKQVLQV IREIPDAFVI ETLAAYGRNR ESLISQIREF SPRVVAVRDE 
TTYKELRKLF PHIEILSGEE GLIAVATAAS VDMTIVASSG IDALPAVMAS IQERKTIALA 
NKESLVAAGE LVTTLAKKNH VQILPIDSEH NALFQCLEGR DPSTIKKLIL TASGGPLRNK 
SKEELQKVTL QEVLKHPIWD MGPKITVDSS TLVNKGLEII EAFWLFGLQA VEIEAVIHPQ 
SLIHGMVEFC DGTILSVMNP PSMLFPIQHV LTFPDRYPSI ISGLNFLTNQ TLEFLPIDDE 
RFPSIRLAKD VLREGGSMGC FFNGANEALV QRFLSGEIAW YQIVSKLQTL MDKYVVRSCL 
SLEDILQVDS EARALASEC