Gene TC0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTC0342 
Symbol 
ID1246385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlamydia muridarum Nigg 
KingdomBacteria 
Replicon accessionNC_002620 
Strand
Start bp403947 
End bp404897 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content36% 
IMG OID637061143 
ProductABC transporter, permease protein, putative 
Protein accessionNP_296720 
Protein GI15834961 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000562705 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCTA GTATCTCTCC GTACTACGGG GTATCATTTT TTGAGTTTTT TATCGTCTTT 
TTTTCGCGTC TTTTTTCTGG GAAATTGTTT TATGATCACC TGTATATCGA TGATATTCAA
GTGATTGTAT TCTTTGCGAT AGCCGTTTCT TGTTCTATAA TCGGAACCTT TTTAGTTCTT
AAAAAAATGG CTATGTATGC AAACGTAGTT TCCCATACCA TATTATTTGG TTTGGTATGC
GCCTGTTTGT TTACTCATCA GCTTACCCAT TTGTCGATGC AAAATTTGAC AATAGCTGCC
ATTTCAACAA CTTTATTAAC CGGAGCCTCT ATCCATTTTA TTCGCAATGT ATTTAAAGTA
GCGGAAGAGG CTAGTACTGC TTTAGTTTTT TCTCTTTTGT TTTCAGCCAG CTTATTGCTT
CTTGTGTTTT TAACAAGGAA TGCTCATGTC GGGACTGAGT TAGTTATTGG AAATGCTGAT
GCATTAGCTA AAACAGATAT TTTCCCAGTA TTTTTGGTTT TATTGAMTAA TTTGGGCGTT
TCTTACTGCT TCTTCTCGAG TTTTATTTGT GTATCTTTTG ATACCGTATT CGCGTTTTCT
TTAGGTATTC GAGTCAAATT AATTGATTAT CTTATGATGT TTTTGCTTTC TGCTTCTATT
GTTGGAGCTT TCAAAGCTGT GGGCGTGTTA ATGTCATTAG CTTTTCTACT AGTCCCAGGA
TTAATCGCTA AGTTGATCGC TTCCTCTGTT CAGGAGATGA TGGGATATTC CATGATTTTT
GGAGTGCTTT CAGCTTTGAT TGCTCCTGCT CTCTCTAGAT CGATTTTATC TGTTCATGGG
ATTGGCTTAT CGACTTCAGG GTTAGCTGTA TGTCTGTTAC TTGTTTTTTA CATAGGGACG
CTTGCAACTG TTTTTGTCAG AAGGCATATT TTACTTCAAT CGAAAAATTG A
 
Protein sequence
MFASISPYYG VSFFEFFIVF FSRLFSGKLF YDHLYIDDIQ VIVFFAIAVS CSIIGTFLVL 
KKMAMYANVV SHTILFGLVC ACLFTHQLTH LSMQNLTIAA ISTTLLTGAS IHFIRNVFKV
AEEASTALVF SLLFSASLLL LVFLTRNAHV GTELVIGNAD ALAKTDIFPV FLVLLXNLGV
SYCFFSSFIC VSFDTVFAFS LGIRVKLIDY LMMFLLSASI VGAFKAVGVL MSLAFLLVPG
LIAKLIASSV QEMMGYSMIF GVLSALIAPA LSRSILSVHG IGLSTSGLAV CLLLVFYIGT
LATVFVRRHI LLQSKN