Gene TC0296 details

Gene Information

• Locus tag: TC0296
• Symbol: trmD
• ID: 1246466
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: +
• Start bp: 353791
• End bp: 354849
• Gene Length: 1059 bp
• Protein Length: 352 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637061096
• Product: tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein
• Protein accession: NP_296675
• Protein GI: 15834916
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0336] tRNA-(guanine-N1)-methyltransferase
• TIGRFAM ID: [TIGR00088] tRNA (guanine-N1)-methyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGATAG ATATTCTTTC TTTATTCCCG GACTATTTTA CTAGTCCACT ACAAGCAACC 
ATTTTGGGCC GAGCTATCAA GCAGGGAGCT TTATCTATTC GTTCCCGCGA TATTCGAGAG 
TTTGGTTTAG GGAAATGGAA GCAAGTAGAC GATGCCCCTT ATAGTGGGGA GGGAATGCTT 
TTGATGGCTG AGCCGGTTGT GCAGGCTATT AGAAGCGTAA AAAGAGAGAA ATCTAAAGTT 
GTATACCTAT CCCCGCAGGG GCAGCTTCTT TCTGCTAAAA AGAGTCGAGA GCTCTCGTTG 
TGTCCGCATT TAATTTTGTT ATGTGGACAT TATGAAGGGA TTGATGAAAG AGCTTTAGCT 
TCTGAAGTGG ATGAAGAGAT AAGTATTGGT GATTACGTTC TTACCAATGG GTGTGCGGCA 
GCGTTGGTTC TTGTAGACGC TCTTGCTCGC TTTATTCCAG GCGTTTTGGG AAACCAAGAA 
AGTGCGGAAT GCGATTCTCT TGAAAATGGG TTGTTAGAGG GGCCTCATTA CACCCGTCCA 
CGAGTTTTTG AAGGCGTACA AGTTCCAGAG ATACTTTTTT GTGGAGATCA CCAAAGAATC 
GCAAATTGGC GAAAGAAGGT TAGTTTAGAG AGAACAAGAG AACGCCGACC GGACCTGTAT 
CTGCAGTATT TTTATGGTGA TAGAGCTTTT TGGGGTGCCC AGGAGGATCC TCTTAAAATG 
AGAGAAACTT CTCCCCAAGC TTTTTCTGTA GTTTTAGAAG TTAAAGATCT TCGAAAAGCT 
AAAAAATTTT ATTCCAGAAT GTTCGGAAAA GAACACTGGG ATGGGGATAA ATTACTCCTT 
GGGGAGAAGA CGAGTCTGTA TCTGCAACAG ACAAATGAAA GAAGGGGTGC AACCAAGGTA 
TTTGTAGAGT TAGAAACTGA GGATGGTTTT GTCCGCTTTT TAAGAAGGTG GGAAATGCTT 
GGTGGACAGC TCGGAGAGGT TGGAATGGGA AATCTACCTC TAAGGCAGGT TTTTGATTTG 
GATGGCCATA TTTGGGTTGT CTCTTGTGTA CAGAAATAG 

 

Protein sequence

MEIDILSLFP DYFTSPLQAT ILGRAIKQGA LSIRSRDIRE FGLGKWKQVD DAPYSGEGML 
LMAEPVVQAI RSVKREKSKV VYLSPQGQLL SAKKSRELSL CPHLILLCGH YEGIDERALA 
SEVDEEISIG DYVLTNGCAA ALVLVDALAR FIPGVLGNQE SAECDSLENG LLEGPHYTRP 
RVFEGVQVPE ILFCGDHQRI ANWRKKVSLE RTRERRPDLY LQYFYGDRAF WGAQEDPLKM 
RETSPQAFSV VLEVKDLRKA KKFYSRMFGK EHWDGDKLLL GEKTSLYLQQ TNERRGATKV 
FVELETEDGF VRFLRRWEML GGQLGEVGMG NLPLRQVFDL DGHIWVVSCV QK