Gene TC0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTC0288 
SymbolileS 
ID1246458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlamydia muridarum Nigg 
KingdomBacteria 
Replicon accessionNC_002620 
Strand
Start bp343596 
End bp346706 
Gene Length3111 bp 
Protein Length1036 aa 
Translation table11 
GC content41% 
IMG OID637061088 
Productisoleucyl-tRNA synthetase 
Protein accessionNP_296667 
Protein GI15834908 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAACG AAGATAAGGT GAGTTTTCCC GCCAAAGAGG AAAAGGTTCT AACTTTTTGG 
AAAGAACAAA ACATTTTTCA AAAAACTTTA GAAAATCGAG ATGGGAGCCC CACTTTTTCT
TTTTATGATG GGCCTCCATT TGCGACGGGA TTACCCCATT ATGGCCATTT ATTAGCTGGC
ACAATTAAAG ATGTTGTATG TCGTTATGCT ACGATGGATG GGCATTATGT GCCTCGACGC
TTTGGTTGGG ATTGCCATGG GGTTCCCGTT GAGTATGAAG TGGAGAAATC ATTAGGTTTA
ACGGAACCTG GAGCTATTGA TCGGTTTGGT ATAGCTAACT TTAATGAAGA GTGCCGTAAG
ATTGTTTTTC GATACGTCGA TGAATGGAAA TATTTTGTAG ATAGAATTGG ACGATGGGTT
GATTTTTCAG CAACGTGGAA GACTATGGAC CTATCTTTCA TGGAAAGTGT TTGGTGGGTA
TTCCATTCTC TTTATAAACA GGGGCTTGTG TATGAAGGGA CGAAGGTTGT TCCCTTTTCT
ACCAAACTAG GGACTCCGCT GTCTAATTTC GAAGCTGGTC AAAATTATAA AGAGGTGGAT
GATCCATCTG TTGTTGCGAA GTTTGCCTTG CAAGATGATC AGGGCATTCT TTTAGCATGG
ACAACAACTC CTTGGACGCT TGTTTCGAAT ATGGCTTTGG CTGTGCATCC AGGACTTACC
TATGTCCGTA TTCAAGACAA GGAATCAGGA GAAGAGTACA TTCTTGGTCA AGAAAGTCTG
GCTCGTTGGT TCCCTGATCG GGAATCCTAT AAATGGATAG GACAATTGTC TGGGGAAAGC
CTTGTTGGTC GAAGATACTG TCCTTTGTTC CCTTATTTCC AGGATCAACA GGATCGGGGA
GCTTTTCGTG TTATTCCTGC AGACTTTATC GAAGAAAGTG AAGGGACTGG TGTTGTTCAC
ATGGCTCCAG CTTTCGGAGA AGCAGACTTT TTTGCTTGCC AGGAACATAA TGTGCCTTTG
GTATGTCCTG TTGATAACCA AGGGTGTTTT ACTTCTGAAG TGACTGATTT TGTCGGAGAA
TACATTAAGT TTGCAGATAA GGGAATTGCT CGTCGGTTGA AGAATGAAAA TAAATTGTTC
TATCAAGGCA CTATTCGTCA CCGTTATCCA TTTTGTTGGA GAACAGATTC TCCATTAATC
TACAAAGCAG TTAATTCTTG GTTTGTCTCT GTAGAAAAAG TAAAACACAA AATGCTGAAA
GCCAATGAAT CGATTCATTG GACTCCGGGA CATATCAAGC ACGGGCGTTT TGGTAAATGG
CTTGAGGGGG CTCGTGATTG GGCCATTAGC AGAAATCGTT ACTGGGGAAC GCCTATACCT
ATCTGGCGTA GTGAAGATGG GGAGCTTCTT GTCATAAGGT CTATCCAGGA GCTAGAAGAA
TTATCTGGGC AGAAGATTGT TGATTTACAT CGTCATTTTA TTGATGAGAT TGTCATTCAT
AAAAATGGAA AAAGTTTCCA TAGAATTCCT TATGTTTTTG ATTGTTGGTT TGATTCTGGG
GCAATGCCTT ATGCCCAAAA CCATTATCCT TTTGAACGTG CCGAAGAAAC TGAAGCGCGT
TTCCCAGCAG ATTTCATTGC TGAAGGGCTT GATCAGACTC GGGGCTGGTT TTATACTTTA
ACTGTAATTG CTGCAGCTTT GTTTGATCAA CCAGCTTTTA AGAACGTAAT TGTGAATGGA
ATTGTTCTTG CTGAAGACGG AAATAAAATG TCTAAGCGAC TGAATAATTA TCCAAGTCCT
AAAAAAATTA TGGATACGTA TGGTGCGGAT GCTTTGCGCC TGTATTTGTT GAATAGTGTC
GTTGTCAAAG CCGAAGATTT AAGGTTCTCT GACAAAGGGG TGGAGGCTGT ACTCAAGCAA
GTGCTTTTAC CTTTGTCTAA TGCTTTGGCT TTTTACAAGA CTTATGCAGA GTTGTATGGT
TTTTCTCCAA ATGAAACAAC AGACTTAGAG CTTGCTGAGA TAGATCGCTG GATTCTTTCT
TCTTTGTATA GCTTAGTAGG GAAAACTAGG GAAAACATGG CGCAGTATGA TTTACATGCC
GCAGTAAGTC CCTTTATAGA TTTCATTGAG GATCTAACAA ATTGGTACAT TCGTCGATCA
CGTCGGCGCT TCTGGGAATC AGAGGATTCT CCAGACCGTC GAGCTGCTTT TGCTACCCTT
TATGAAGTAC TGATGGTTTT TTCTAAGATT ATAGCTCCGT TCATTCCTTT TACTGCTGAG
GATATGTATC AGCAATTGCG GGTTGAAACG GATCCTGAAT CTGTGCATTT GTGTGATTTC
CCTCACGTTG TTTTGGAAAA AATCCTTCCT GATTTAGAAA AGAAGATGCA AGACATTCGG
GAGATCGTTG CTTTAGGACA TTCTCTACGT AAAGAACATA AGCTTAAAGT TCGACAGCCA
CTTCAACATA TGTATATTGT CGGTGCTAAA GAACGAATGG CTGCGTTGGC TCAAGTTGAC
TCATTGATTG GAGAGGAGTT GAATGTTAAG GAAGTGCATT TTTGCTCAGA GACTCCAGAA
TATGTGACTA CTCTTGTTAA GCCCAATTTC CGTTCTCTAG GAAAAAGGGT TGGGAATCGT
CTCCCCGAAA TTCAAAAGGC TTTGGCAGGA CTTTCTCAAG AGCAAATTCA AGCGTTTATG
CATAATGGCT TTATGGTTCT TTCTTTAGGA GAAGAAACGA TTTCTCTAAA TGAAGAGGAT
ATTACCGTGT CCTGGGAAGC CGCTCCGGGG TTTGTAGCAA GAAGCTCAGC CTCTTTTGTA
GCGATTTTAG ATTGTCAACT AACTTCTCCT CTGATTATGG AAGGGATAGC CAGAGAAATT
GTAAATAAGA TCAATACTAT GCGAAGAAAT GGGAAATTAC ACGTTTCGGA TCGTATTGCT
ATACGTTTGC ATGCTCCTAA AATTGTTCAG GAAGCTTTTT CTCAATATGA AGAATATATT
TGCGAAGAGA CATTAACAAC TTCGGTTTCC TTTATAGATG ACAAGGAGGG AGAGGAGTGG
GATGTTAACG GTCACGCGGT CTCACTGTCC CTAGAGGTGA TTGGTCATTG A
 
Protein sequence
MDNEDKVSFP AKEEKVLTFW KEQNIFQKTL ENRDGSPTFS FYDGPPFATG LPHYGHLLAG 
TIKDVVCRYA TMDGHYVPRR FGWDCHGVPV EYEVEKSLGL TEPGAIDRFG IANFNEECRK
IVFRYVDEWK YFVDRIGRWV DFSATWKTMD LSFMESVWWV FHSLYKQGLV YEGTKVVPFS
TKLGTPLSNF EAGQNYKEVD DPSVVAKFAL QDDQGILLAW TTTPWTLVSN MALAVHPGLT
YVRIQDKESG EEYILGQESL ARWFPDRESY KWIGQLSGES LVGRRYCPLF PYFQDQQDRG
AFRVIPADFI EESEGTGVVH MAPAFGEADF FACQEHNVPL VCPVDNQGCF TSEVTDFVGE
YIKFADKGIA RRLKNENKLF YQGTIRHRYP FCWRTDSPLI YKAVNSWFVS VEKVKHKMLK
ANESIHWTPG HIKHGRFGKW LEGARDWAIS RNRYWGTPIP IWRSEDGELL VIRSIQELEE
LSGQKIVDLH RHFIDEIVIH KNGKSFHRIP YVFDCWFDSG AMPYAQNHYP FERAEETEAR
FPADFIAEGL DQTRGWFYTL TVIAAALFDQ PAFKNVIVNG IVLAEDGNKM SKRLNNYPSP
KKIMDTYGAD ALRLYLLNSV VVKAEDLRFS DKGVEAVLKQ VLLPLSNALA FYKTYAELYG
FSPNETTDLE LAEIDRWILS SLYSLVGKTR ENMAQYDLHA AVSPFIDFIE DLTNWYIRRS
RRRFWESEDS PDRRAAFATL YEVLMVFSKI IAPFIPFTAE DMYQQLRVET DPESVHLCDF
PHVVLEKILP DLEKKMQDIR EIVALGHSLR KEHKLKVRQP LQHMYIVGAK ERMAALAQVD
SLIGEELNVK EVHFCSETPE YVTTLVKPNF RSLGKRVGNR LPEIQKALAG LSQEQIQAFM
HNGFMVLSLG EETISLNEED ITVSWEAAPG FVARSSASFV AILDCQLTSP LIMEGIAREI
VNKINTMRRN GKLHVSDRIA IRLHAPKIVQ EAFSQYEEYI CEETLTTSVS FIDDKEGEEW
DVNGHAVSLS LEVIGH