| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0264 |
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| Symbol | pmpH |
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| ID | 1246434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlamydia muridarum Nigg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002620 |
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| Strand | + |
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| Start bp | 314511 |
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| End bp | 317462 |
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| Gene Length | 2952 bp |
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| Protein Length | 983 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637061064 |
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| Product | polymorphic membrane protein H family protein |
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| Protein accession | NP_296643 |
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| Protein GI | 15834884 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAGTAA TGCCTTTTTC TTTGAGATCT ACATCATTTT GTTTTTTAGC CTGTTTATGT
TCTTATTCAT ATGGATTAGC GAGTTCTCCT CAGGTACTGA CCCCCAATGT AATCATCCCT
TTTAAAGGAG ACGATATCTA TTTAAATGGG GATTGCGTTT TTGCAAGTAT CTATGCAGGA
GCAGAGCAGG GATCGATTAT TTCTGCTAAT GGGCAAAATC TAACAATCGT AGGACAAAAC
CACACTTTAT CATTTACGGA TTCCCAAGGG CCAGCCCTTC AAAATTGTGC TTTCATTTCA
GCAGAAGAAA AGATCTCTCT AAGAGATTTT TCGAGCCTTT TGTTTTCGAA AAATGTTTCT
TGCGGGGAGA AAGGAATGAT TTCAGGGAAA ACCGTAAGCA TTTCAGGGGG AGATAGTATA
GTTTTTAAGG ATAACTCTGT TGGTTATTCT TCATTACCCT CTGTGGGGCA AACTCCTACA
ACTCCAATTG TTGGCGATGT TTTAAAGGGA TCCATTTTTT GTGTGGAGAC AGGTTTAGAG
ATTTCTGGAG TCAAAAAAGA GCTTGTTTTC GATAACACTG CTGGGAATTT TGGGGCAGTA
TTCTGTAGTC GTGCCGCTCA AGGAGACACG ACTTTCACAG TGAAAGACTG TAAGGGTAAA
ATTCTTTTTC AAGATAACGT AGGCTCTTGT GGAGGCGGCG TAATTTATAA AGGGGAAGTA
CTTTTCCAAG ATAATGAAGG AGAAATGCTT TTCCGAGGAA ATTCAGCTCA TGATGATTTG
GGAATTCTCG ATGCTAACCC ACAGCCTCCT ACTGAAGTAG GAGGTGGGGG TGGTGTCATT
TGTACCCCAG AGAAAACGGT AACTTTTAAG GGGAATAAAG GGCCTATTAC CTTTGATTAT
AATTTTGCAA AAGGTCGAGG AGGGGCAATC CAATCACAGA CCTTTTCTTT GGTAGCTGAT
AGTGCTGTTG TTTTCAGTAA TAATACAGCT GAGAAAGGTG GAGGCGCCAT TTATGCTCTT
GAGGTTAACG TGAGCACAAA TGGAGGATCT ATTCTTTTTG AGGGAAATAG AGCTTCTGAG
GGTGGGGCTA TCTGTGTGAG CGAGCCGATC GCTGCTAATA ATGGAGGGCT CACTTTACAT
GCTGCTGATG GGGACATTAT TTTCTCGAAA AATATGACGA GTGATCGTCC TGGAGAACGC
AGTGCAATCC GGATCTTAGA TAGTGGAACA AATGTCTCTT TAAATGCTTC AGGGGCATCG
AAGATGATTT TTTATGATCC TGTTGTGCAA AATAATCCCG CAACTCCACC TACTGGTACG
TCTGGGGAAA TTAAGATCAA TGAGTCCGGG AGTGGATCGG TTGTGTTTAC AGCAGAGACT
TTGACTCCTT CGGAAAAATT GAATGTTATC AACGCTACTT CTAATTTCCC AGGAAATTTA
ACGGTATCTA GTGGAGAATT AGTTGTTACG AAGGGAGCGA CACTAACAGT AGGAAATATC
ACAGCAACAT CAGGACGAGT AACTTTAGGA TCAGGGGCTT CGTTATCCGC CGTTGCAGGT
ACTGCTGGCA CTTGTACGGT GTCTAAATTA GGGATTGATT TAGAGTCCTT CCTAGTCCCT
ACTTATGAGA CTGCAAAGTT GGGTGCGGAT ACAACAGTAG CGGTGAATAA CAATCCTACT
TTAGACCTAG TAATGGCGAA TGAGACGGAG ATGTATGATA ATCCGCTTTT TATGAACGCT
GTTACAATCC CTTTTGTGAC ATTGGTTTCT CTCCAAACTA CTGGTGGTGT TACTACAAGT
GCCGTTACTC TGAATAATGC AGATACTGCG CATTATGGGT ATCAAGGATC TTGGTCTGCT
GATTGGAGAA GGCCTCCTTT AGCTCCTGAT CCTAGCGGCA TGACACCTCT TGATAAAAGT
AATACATTGT ATGTGACATG GAGGCCATCC TCTAACTACG GTGTGTATAA GTTAGATCCT
CAAAGAAGGG GTGAGTTGGT CCCGAATTCT TTATGGGTAT CTGGATCTGC CTTAAGAACC
TTTACAAATG GTTTGAAGGA ACATTACGTC TCTAGAGATG TCGGATTTAT TGCATCTGTA
CAAGCCTTAG GGGATTATGT TCTGAATTAT AAGCAGGGTA ACCGAGATGG CTTTCTAGCT
AGGTACGGAG GTTTTCAAGC TGTTGCGGCT TCTCACTATG AAAATGGGGG GATCTTTGGG
GTAGCTTTCG GTCAACTTTA TGGTCAAACT AAGAGCCGTT TGTACGATTC TAAGGATGCT
GGAAACATTA CGATTTTGTC CTGTTTTGGA CGAAGTTATA TCGATGTTAA AGGAACAGAA
ACCGTTGTGT ATTGGGAGAC GGCTTATGGA TATTCTGTTC ATAGAATGCA TACGCAGTAT
TTCAATGGAA AAACGAATAA GTTTGATCAT TCGAAATGTC GTTGGCACAA CAATAGTTAT
TATGCATTTG TAGGTGCAGA ACATAATTTC TTGGAGTATT GTATTCCTAC TCGTCAATTA
GCTAGGGATT ATGATCTTAC AGGATTTATG CGTTTCGAAA TGTCGGGAGG TTGGTCGAGT
GGTGCAAAAG AAACGGGTGC TTTACCTAGA CATTTTGATC GAGGAACAGG GCATAATATG
TCTCTTCCAA TAGGGGTTGT AGCTCATGCT GTTTCTAATG GACGAAGATC TCCTCCATCT
AAATTGACGA TTAACATGGG ATATAGACCA GACATTTGGC GGGTGACTCC ACATTGCAAT
ATGAAAATTA TTGCAAACGG AGTTAAGACT CCTATACAGG GATCTCCTCT AGCTCGGCAC
GCCTTCTTTT TAGAAGTTCA TGATACTCTG TATGTTCGTC ATTTGGGCAG AGCCTATATG
AATTATTCTT TAGATGCTCG TCATCGACAA ACTACGCATT TCGTATCTTT AGGATTGAAT
CGTATCTTTT AA
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| Protein sequence | MLVMPFSLRS TSFCFLACLC SYSYGLASSP QVLTPNVIIP FKGDDIYLNG DCVFASIYAG
AEQGSIISAN GQNLTIVGQN HTLSFTDSQG PALQNCAFIS AEEKISLRDF SSLLFSKNVS
CGEKGMISGK TVSISGGDSI VFKDNSVGYS SLPSVGQTPT TPIVGDVLKG SIFCVETGLE
ISGVKKELVF DNTAGNFGAV FCSRAAQGDT TFTVKDCKGK ILFQDNVGSC GGGVIYKGEV
LFQDNEGEML FRGNSAHDDL GILDANPQPP TEVGGGGGVI CTPEKTVTFK GNKGPITFDY
NFAKGRGGAI QSQTFSLVAD SAVVFSNNTA EKGGGAIYAL EVNVSTNGGS ILFEGNRASE
GGAICVSEPI AANNGGLTLH AADGDIIFSK NMTSDRPGER SAIRILDSGT NVSLNASGAS
KMIFYDPVVQ NNPATPPTGT SGEIKINESG SGSVVFTAET LTPSEKLNVI NATSNFPGNL
TVSSGELVVT KGATLTVGNI TATSGRVTLG SGASLSAVAG TAGTCTVSKL GIDLESFLVP
TYETAKLGAD TTVAVNNNPT LDLVMANETE MYDNPLFMNA VTIPFVTLVS LQTTGGVTTS
AVTLNNADTA HYGYQGSWSA DWRRPPLAPD PSGMTPLDKS NTLYVTWRPS SNYGVYKLDP
QRRGELVPNS LWVSGSALRT FTNGLKEHYV SRDVGFIASV QALGDYVLNY KQGNRDGFLA
RYGGFQAVAA SHYENGGIFG VAFGQLYGQT KSRLYDSKDA GNITILSCFG RSYIDVKGTE
TVVYWETAYG YSVHRMHTQY FNGKTNKFDH SKCRWHNNSY YAFVGAEHNF LEYCIPTRQL
ARDYDLTGFM RFEMSGGWSS GAKETGALPR HFDRGTGHNM SLPIGVVAHA VSNGRRSPPS
KLTINMGYRP DIWRVTPHCN MKIIANGVKT PIQGSPLARH AFFLEVHDTL YVRHLGRAYM
NYSLDARHRQ TTHFVSLGLN RIF
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