| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0262 |
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| Symbol | pmpE/F-2 |
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| ID | 1246432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlamydia muridarum Nigg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002620 |
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| Strand | - |
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| Start bp | 308277 |
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| End bp | 311354 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637061062 |
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| Product | polymorphic membrane protein E/F family protein |
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| Protein accession | NP_296641 |
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| Protein GI | 15834882 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCGCA GAATTCTCCC TCTTTCACTT GTTTTCATTC CTTTATCTTG TATTTCGGCC
AGTGAAACCG ATACACTCAA ACTTCCGAAC TTGACTTTTG GTGGTAGAGA GATTGAATTC
ATAGTTACTC CGCCTAGCTC CATTGCTGCT CAATACATCA CTTACGCAAA TGTTTCTAAT
TATAGAGGGA ACTTTACTAT TTCAAGTTGT ACGCAGGATC AATGGTTTTC GAGAGGTTTA
AGCACTACAA ACTCTAGTGG AGCTTTTGTT GAGTCTATGA CTTCTTTCAC AGCCATTGAC
AATGCAGACT TGTTTTTTTG TAACAATTAT TGCACCCATC AGGGAGGAGG GGGAGCTATA
AATGCTACAG GCCTTATTAG CTTTAAAAAC AACCAAAACA TATTGTTCTA TAATAATACA
ACTATTGGAA CTCAATTTAC AGGAGTAGCA TTAAGAACCG AAAGGAATCG CGGAGGGGCT
TTATACGGAT CAAGCATCGA GCTAATTAAT AATCATAGCT TAAATTTTAT CAATAACACT
TCTGGGGATA TGGGAGGAGC CGTATCCACA ATCCAAAACC TAGTTATCAA AAATACGTCC
GGAATAGTTG CTTTTGAAAA TAACCATACT ACTGATCACA TACCCAACAC ATTTGCTACA
ATTCTTGCTC GAGGAGGAGC TGTTGGCTGC CAAGGTGCCT GCGAAATCTC ACACAATACT
GGTCCGGTAG TCTTCAATTC CAACTATGGA GGATACGGAG GAGCTATCAG CACCGGGGGA
CAGTGTATTT TTAGAGATAA TAAGGATAAG CTTATTTTTA TAAATAATAG CGCTTTAGGA
TGGCATAACA CTAGTGCTCA AGGAAATGGA GCAGTTATAA GCGCAGGAGG AGAGTTTGGT
CTTCTAAATA ATAAAGGCCC TATCTACTTT GAGAATAATA ATGCCTCATA CATAGCAGGA
GCTATTTCCT GCAACAACCT TAATTTTCAA GAAAATGGTC CTATCTATTT TCTTAATAAT
TCGGCTCTGT ATGGAGGAGC TTTTCACCTA TTTGCAAGCC CAGCTGCGAA CTATATTCAT
ACTGGCTCTG GGGATATTAT CTTCAACAAT AATACAGAGC TTTCAACTAC CGGAATGTCA
GCAGGTTTGC GAAAACTTTT TTATATTCCT GGAACAACCA ACAATAACCC TATCACCCTA
TCTCTTGGTG CTAAGAAAGA TACTCGCATC TATTTTTATG ATCTTTTTCA ATGGGGAGGC
TTAAAAAAAG CTAATACACC CCCTGAAAAT AGCCCGCACA CCGTTACCAT CAATCCTTCG
GATGAGTTCT CTGGCGCTGT TGTGTTTTCA TACAAAAACA TATCCAGTGA TCTACAAGCT
CACATGATTG CCAGTAAAAC TCATAACCAA ATTAAAGACT CCCCCACTAC CTTGAAGTTT
GGGACTATGT CCATAGAAAA TGGCGCAGAG TTTGAATTTT TCAATGGCCC TCTTACTCAA
GAAAGCACTA GCCTTCTTGC TTTAGGACAA GATTCTATTC TTACTGTAGG GAAAGACGCT
TCTCTCACTA TTACGCATCT TGGAATCATT TTGCCAGGTC TTCTCAATGA CCAAGGTACT
ACAGCTCCAC GTATTCGTGT TAATCCCCAA GATATGACAC AGAATACAAA CTCTAACCAA
GCTCCAGTAA GCACAGAGAA CGTGGCAACT CAAAAGATCT TTTTCTCCGG TCTTGTCTCG
TTAGTAGATG AAAATTACGA ATCAGTTTAT GACAGCTGCG ACCTATCCCG AGGAAAAGCA
AATCAACCCA TTTTACATAT CGAAACGACT AATGATGCGC AGTTAAGCAA TGATTGGAAA
AACACTCTCA ATACCTCGCT ATATTCTTTA CCACATTACG GATACCAAGG ACTCTGGACA
TCTAATTGGA TGACAACCAC CCGTACGGTC TCTCTTACCA ATAGTACAGA GACTCAAACA
GCCAACAATT CTATTCAAGA ACAAAAAAAC ACTAGCGAAA CTTTTGATTC CAACAGTACA
ACTACAGCTA AGATTCCTTC CATTAGAGCT TCTACAGGAG GAACAACTCC TCTTGCTACA
ACGGACGTAA CAGTCACTAG ACACTCCTTA GTAGTGAGCT GGACCCCAAT CGGATATATA
GCAGATCCTG CTCGTAGAGG GGATCTTATT GCGAATAATT TAGTGTCTTC TGGAAGAAAT
ACAACCCTGT ACTTACGTTC ATTACTACCA GATGACTCTT GGTTCGCTTT ACAAGGATCT
GCAGCTACGC TATTCACCAA ACAGCAGAAA CGCTTAGATT ATCACGGATA TTCTTCTGCA
TCGAAAGGAT ATGCTATATC TTCACAAGCA TCAGGAGCAC ACGGACATAA GTTTTTATTT
TCCTTTTCCC AATCCTCCGA CACAATGAAA GAGAAACGTA CCAATAATAA AATTTCTTCT
CGTTATTATC TCTCCGCTCT GTGTTTTGAA CAACCTATGT TTGATCGTAT CGCTCTTATT
GGAGCAGCTG CTTATAACTA TGGTACTCAT AAAACATATA ACTTCTATGG AACGAAAAAG
TTTTCTAAAG GGAACTTTCA CTCTACGACT CTGGGGGGCT CTCTACGTTG CGAACTGCGG
GATAGTATGC CTTTCCAATC GATTATGTTG ACACCATTCA TTCAAGCTCT CATCTCCCGA
ACAGAGCCTG CATCTATCCA GGAGCAGGGA GACCTGGCTA GATTATTTTC GTTAAAACAA
CCACATACAG CTGTTGTTTC TCCAATAGGA ATTAAAGGTG TTTATTCTTC GAATAAATGG
CCAACTGTAT CCTGCGAAAT GGAGGTAGCA TACCAGCCTA CTCTTTACTG GAAGCGCCCC
ATTCTTAATA CCGTTTTAAT CAAAAACAAT GGTTCTTGGG AAACAACAAA CACTCCTTTA
GCTAAGCATT CCTTTTATGG GAGAGGATCA TCTTCTCTAA AATTCTCTTA TCTTAAACTA
TTCGCTAATT ATCAAGCGCA GGTGGCTACT TCTACAGTCT CACACTACAT GAATGCAGGA
GGGGCTCTGG TCTTTTAA
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| Protein sequence | MTRRILPLSL VFIPLSCISA SETDTLKLPN LTFGGREIEF IVTPPSSIAA QYITYANVSN
YRGNFTISSC TQDQWFSRGL STTNSSGAFV ESMTSFTAID NADLFFCNNY CTHQGGGGAI
NATGLISFKN NQNILFYNNT TIGTQFTGVA LRTERNRGGA LYGSSIELIN NHSLNFINNT
SGDMGGAVST IQNLVIKNTS GIVAFENNHT TDHIPNTFAT ILARGGAVGC QGACEISHNT
GPVVFNSNYG GYGGAISTGG QCIFRDNKDK LIFINNSALG WHNTSAQGNG AVISAGGEFG
LLNNKGPIYF ENNNASYIAG AISCNNLNFQ ENGPIYFLNN SALYGGAFHL FASPAANYIH
TGSGDIIFNN NTELSTTGMS AGLRKLFYIP GTTNNNPITL SLGAKKDTRI YFYDLFQWGG
LKKANTPPEN SPHTVTINPS DEFSGAVVFS YKNISSDLQA HMIASKTHNQ IKDSPTTLKF
GTMSIENGAE FEFFNGPLTQ ESTSLLALGQ DSILTVGKDA SLTITHLGII LPGLLNDQGT
TAPRIRVNPQ DMTQNTNSNQ APVSTENVAT QKIFFSGLVS LVDENYESVY DSCDLSRGKA
NQPILHIETT NDAQLSNDWK NTLNTSLYSL PHYGYQGLWT SNWMTTTRTV SLTNSTETQT
ANNSIQEQKN TSETFDSNST TTAKIPSIRA STGGTTPLAT TDVTVTRHSL VVSWTPIGYI
ADPARRGDLI ANNLVSSGRN TTLYLRSLLP DDSWFALQGS AATLFTKQQK RLDYHGYSSA
SKGYAISSQA SGAHGHKFLF SFSQSSDTMK EKRTNNKISS RYYLSALCFE QPMFDRIALI
GAAAYNYGTH KTYNFYGTKK FSKGNFHSTT LGGSLRCELR DSMPFQSIML TPFIQALISR
TEPASIQEQG DLARLFSLKQ PHTAVVSPIG IKGVYSSNKW PTVSCEMEVA YQPTLYWKRP
ILNTVLIKNN GSWETTNTPL AKHSFYGRGS SSLKFSYLKL FANYQAQVAT STVSHYMNAG
GALVF
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