| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0261 |
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| Symbol | pmpE/F-1 |
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| ID | 1246431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlamydia muridarum Nigg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002620 |
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| Strand | - |
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| Start bp | 305344 |
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| End bp | 308274 |
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| Gene Length | 2931 bp |
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| Protein Length | 976 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637061061 |
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| Product | polymorphic membrane protein E/F family protein |
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| Protein accession | NP_296640 |
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| Protein GI | 15834881 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC TGTTCTTTTT TGTCCTTATT GGAAGCTCTA TACTGGGATT TACTCGAGAA
GTCCCTCCTT CGATTCTTTT AAAGCCTATA CTAAATCCAT ACCATATGAC CGGGTTATTT
TTTCCCAAGG TTAATTTGCT TGGAGACACA CATAATCTCA CTGATTACCA TTTGGATAAT
CTAAAATGCA TTCTGGCTTG CCTACAAAGA ACTCCTTATG AAGGAGCTGC TTTCACAGTA
ACCGATTACT TAGGTTTTTC AGATACACAA AAGGATGGTA TTTTTTGTTT TAAAAATCTT
ACTCCAGAGA GTGGAGGGGT TATTGGTTCC CCAACTCAAA ACACTCCTAC TATAAAAATT
CATAATACAA TCGGCCCCGT TCTTTTCGAA AATAATACCT GTCATAGACT GTGGACACAG
ACCGATCCCG AAAATGAAGG AAACAAAGCA CGCGAAGGCG GGGCAATTCA TGCTGGGGAC
GTTTACATAA GCAATAACCA GAACCTTGTC GGATTCATAA AGAACTTTGC TTATGTTCAA
GGTGGAGCTA TTAGTGCTAA TACTTTTGCC TATAAAGAAA ATAAATCGAG CTTTCTTTGC
CTAAATAACT CTTGTATACA AACTAAGACG GGAGGGAAAG GTGGTGCTAT TTACGTTAGT
ACGAGCTGCT CTTTCGAGAA CAATAACAAG GATCTGCTTT TCATCCAAAA CTCCGGCTGT
GCAGGAGGAG CTATCTTCTC TCCAACCTGT TCTCTAATAG GAAACCAAGG AGATATTGTT
TTTTACAGCA ACCACGGTTT TAAAAATGTT GATAATGCAA CTAACGAATC TGGGGATGGA
GGAGCTATTA AAGTAACTAC CCGCTTGGAC ATCACCAATA ATGGTAGTCA AATCTTTTTT
TCTGATAATA TCTCAAGAAA TTTTGGAGGA GCTATTCATG CTCCTTGTCT TCATCTTGTT
GGTAATGGGC CAACCTATTT TACAAACAAT ATAGCTAATC ACACAGGTGG GGCTATTTAT
ATAACAGGAA CAGAAACCTC AAAGATTTCT GCAGATCACC ATGCTATTAT TTTTGATAAT
AACATTTCTG CAAACGCCAC CAATGCGGAC GGATCTAGCA GCAACACTAA TCCTCCTCAC
AGAAATGCGA TCACTATGGA CAATTCCGCT GGAGGAATAG AACTTGGTGC AGGGAAGAGC
CAGAATCTTA TTTTCTATGA TCCTATTCAA GTGACGAATG CTGGAGTTAC CGTAGACTTC
AATAAGGATG CCTCCCAAAC CGGATGTGTA GTTTTCTCTG GAGCGACTGT CCTTTCTGCA
GATATTTCTC AGGCTAATTT GCAAACTAAA ACACCTGCAA CGCTTACTCT CAGTCACGGT
CTTCTGTGTA TCGAAGATCG TGCTCAGCTC ACAGTGAACA ATTTTACACA AACAGGAGGG
ATTGTAGCCT TAGGAAATGG AGCAGTTTTA AGCAGCTACC AACACAGCAC TACAGACGCC
ACTCAAACTC CCCCTACAAC CACCACTACA GATGCTTCCG TAACTCTTAA TCACATTGGA
TTAAATCTCC CCTCTATTCT TAAGGATGGA GCAGAGATGC CTCTATTATG GGTAGAACCT
ATAAGCACAA CTCAAGGTAA CACTACAACA TATACGTCAG ATACCGCGGC TTCCTTCTCA
TTAAATGGAG CCACACTCTC TCTCATTGAT GAAGATGGAA ATTCTCCCTA TGAAAACACG
GACCTCTCTC GTGCATTGTA CGCTCAACCT ATGCTAGCAA TTTCTGAGGC CAGTGATAAC
CAATTGCAAT CCGAAAGCAT GGACTTTTCT AAAGTTAATG TTCCTCACTA TGGATGGCAA
GGACTTTGGA CCTGGGGGTG GGCAAAAACT GAAAATCCAA CAACAACTCC TCCAGCAACA
ATTACTGATC CGAAAAAAGC TAATCAGTTT CATAGAACTT TATTATTAAC GTGGCTCCCT
GCTGGTTATA TCCCCAGCCC TAAACATAAA AGCCCTTTAA TAGCTAATAC CTTGTGGGGG
AATATACTTT TTGCAACGGA AAACTTAAAA AATAGCTCAG GGCAAGAACT TCTTGATCGT
CCTTTCTGGG GAATTACAGG AGGGGGCTTG GGGATGATGG TCTATCAAGA ACCTAGAAAA
GACCATCCTG GATTCCACAT GCATACCTCC GGATATTCAG CAGGAATGAT TACAGGAAAC
ACACATACCT TCTCATTACG ATTCAGCCAG TCCTATACAA AACTCAATGA ACGTTATGCC
AAGAACTATG TGTCTTCTAA AAATTACTCT TGCCAAGGGG AAATGCTTTT GTCCTTACAA
GAAGGACTCA TGCTGACTAA ACTAATTGGT CTCTATAGTT ATGGGAATCA CAACAGCCAC
CATTTCTATA CCCAAGGAGA AGACCTATCG TCTCAAGGGG AGTTCCATAG TCAGACTTTT
GGAGGGGCTG TCTTTTTTGA TCTACCTCTG AAACCTTTTG GAAGAACACA CATACTTACA
GCTCCTTTCT TAGGTGCCAT TGGTATGTAT TCTAAGCTGT CTAGCTTTAC AGAAGTAGGA
GCCTATCCAA GAACCTTTAT TACAGAAACG CCTTTAATCA ATGTCCTGAT TCCTATCGGA
GTAAAAGGTA GCTTCATGAA TGCCACCCAT AGACCTCAGG CCTGGACTGT AGAGCTTGCT
TACCAACCTG TTCTTTACAG ACAAGAACCT AGTATCTCTA CCCAATTACT CGCTGGTAAA
GGTATGTGGT TTGGGCATGG AAGTCCTGCA TCTCGCCACG CTCTAGCTTA TAAAATTTCA
CAGAAAACAC AGCTTTTGCG ATTTGCAACA CTTCAACTCC AGTATCACGG ATACTATTCG
TCTTCCACTT TCTGTAATTA TCTGAATGGA GAGGTATCTT TACGTTTCTA A
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| Protein sequence | MKKLFFFVLI GSSILGFTRE VPPSILLKPI LNPYHMTGLF FPKVNLLGDT HNLTDYHLDN
LKCILACLQR TPYEGAAFTV TDYLGFSDTQ KDGIFCFKNL TPESGGVIGS PTQNTPTIKI
HNTIGPVLFE NNTCHRLWTQ TDPENEGNKA REGGAIHAGD VYISNNQNLV GFIKNFAYVQ
GGAISANTFA YKENKSSFLC LNNSCIQTKT GGKGGAIYVS TSCSFENNNK DLLFIQNSGC
AGGAIFSPTC SLIGNQGDIV FYSNHGFKNV DNATNESGDG GAIKVTTRLD ITNNGSQIFF
SDNISRNFGG AIHAPCLHLV GNGPTYFTNN IANHTGGAIY ITGTETSKIS ADHHAIIFDN
NISANATNAD GSSSNTNPPH RNAITMDNSA GGIELGAGKS QNLIFYDPIQ VTNAGVTVDF
NKDASQTGCV VFSGATVLSA DISQANLQTK TPATLTLSHG LLCIEDRAQL TVNNFTQTGG
IVALGNGAVL SSYQHSTTDA TQTPPTTTTT DASVTLNHIG LNLPSILKDG AEMPLLWVEP
ISTTQGNTTT YTSDTAASFS LNGATLSLID EDGNSPYENT DLSRALYAQP MLAISEASDN
QLQSESMDFS KVNVPHYGWQ GLWTWGWAKT ENPTTTPPAT ITDPKKANQF HRTLLLTWLP
AGYIPSPKHK SPLIANTLWG NILFATENLK NSSGQELLDR PFWGITGGGL GMMVYQEPRK
DHPGFHMHTS GYSAGMITGN THTFSLRFSQ SYTKLNERYA KNYVSSKNYS CQGEMLLSLQ
EGLMLTKLIG LYSYGNHNSH HFYTQGEDLS SQGEFHSQTF GGAVFFDLPL KPFGRTHILT
APFLGAIGMY SKLSSFTEVG AYPRTFITET PLINVLIPIG VKGSFMNATH RPQAWTVELA
YQPVLYRQEP SISTQLLAGK GMWFGHGSPA SRHALAYKIS QKTQLLRFAT LQLQYHGYYS
SSTFCNYLNG EVSLRF
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