| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0230 |
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| Symbol | pnpA |
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| ID | 1246399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlamydia muridarum Nigg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002620 |
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| Strand | - |
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| Start bp | 271947 |
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| End bp | 274028 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637061029 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | NP_296609 |
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| Protein GI | 15834850 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.336814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTTG AGACTTTTTC TGTTGCGTTA GACAAAGATA AGACACTGAT TTTCGAGACA
GGGAAAATAG CTCGCCAAGC CAATGGAGCT GTTCTTGTCA AAATGAATGA AACTTGGGTT
TTTTCATCAG CGTGCGCGGC CTCTTTATCA GAGGCCGTAG ATTTTCTGCC TTTCAGAGTA
GACTATCAAG AAAAGTTTTC CTCCGCGGGG AAAACCTCTG GAGGATTTCT GAAACGCGAA
GGTCGTCCCT CCGAGAAAGA AATTCTTATT TCTCGACTGA TAGATCGCTC TTTGCGTCCA
TCATTCCCTA ATAGACTTAT GCAAGACATT CAAGTCTTGT CCTACGTTTG GTCTTATGAC
GGGAAAACTT TACCAGACCC CTTAGCTATT TGTGGAGCTT CTGCAGCTTT AGCTATCTCA
GAGGTCCCTC AGAATTGTAT TGTTGCAGGT GTACGCGTCG GTCTCGTCGA AGGAAAATGG
GTAGTTAACC CAACTAAAGA TGAGTTAGAC GCATCCAAGC TTGATCTCGT TATGGCAGGA
ACAGCTTCTG CGGTATTAAT GATCGAAGGT CATTGCGACT TTTTGACTGA AGAGCAAGTT
TTAGAAGCTA TTGCTTTTGG ACAAAAATAC ATAGCTAAAA TATGTGACGC TATTGAAGCT
TGGCAGAAAG CGATTGGTAA GGAAAAACAG CTCTCGGCTG TCCTTGATCT GCCGGAAGAT
GTGCAAAATG TTGTTTCGAA TTTTATTAGA GAAAAATTCG AAAAAGCACT GTCTTTTAGA
GATAGAGACG CTTTAGAACA AGTCTCAAAA GAGTTAGAAG AATCTGTTGT CGCCAACTTA
GTTCAAGAAG AAAGTGATTT TTCTTTATTG AACGTGAAAG CTGCATTTAA GAATGCAAAA
TCCAATCAAA TGCGAGCTTT AATTAGAGAT CTCGGCATTC GCGTAGACGG ACGAAGTACA
ACAGAAATTC GCCCTATTTC CATAGAAGTC TCTTTCCTTC CACGAACACA TGGAAGCTGC
CTATTTACCC GTGGAGAAAC ACAAAGTGTA GCTGTATGCA CACTTGGGGG TGAAAGTATG
GCACAACGAT TTGAAGACCT AAATGGGGAT GGAGCAGCGC GCTTTTATTT GCAGTATTTT
TTCCCTCCTT TCTCTGTAGG AGAAGTTGGT AGAATCGGAT CTCCAGGGAG ACGCGAAATA
GGTCACGGAA AATTAGCTGA AAAAGCTTTA AGTCATGTCC TTCCTGAAGC ATCTCGATTC
CCTTACACTG TTCGAGTGGA GTCTAATATT ACAGAATCCA ATGGGTCTTC TTCTATGGCT
TCTGTATGTG GGGGCTGTCT TTCTCTGATG GATGCAGGAG TGCCTATCAA AGCTCCTGTA
GCCGGCATTG CTATGGGTCT AATCCTAGAT CAAGATAAGG CTATTGTCCT TTCTGATATT
TCAGGGATAG AAGATCATCT CGGCGATATG GATTTTAAAG TCGCGGGAAC TGAAGAAGGA
ATCACAGCAT TCCAAATGGA CATTAAAGTA GAAGGAATTA CCCATGAGAT CATGGAGCAG
GCGTTGGCCC AAGCTAAGCA AGGTCGAAGC CATATCCTAA ATCTTATGAC ACAGGTAATG
TCTTCTCCTA ATGATTCTGT TTCCAGATAT GCTCCTCGTA TTGAAACTAT GCAAATCAAT
ACTTCAAAAA TCGCGACAGT AATAGGTCCT GGAGGGAAAC AGATCCGTCA AATTATTGAG
CGATCAGGAG CTCAAGTTGA CATTAACGAT AACGGGCTCA TTAACATATC AGCTAACACC
CAAGAATCTA TCGATAAAGC TAAGGAGCTT ATTGAGGGAT TAACGGGAGA AGTTGAGGTT
GGCAAGATCT ATAACGGCCG AGTCACTTCC GTTGTGGCCT TTGGAGCATT TGTAGAAGTC
CTTCCTGGTA AAGAGGGTCT TTGTCATATT TCAGAATTGT CTAAACAAAA AGTAGACAAT
GTAGCTGATT TCGTAAAAGA AGGTGATCGC CTAGCGGTTA AGTTGCTCAG CATCAATGAG
AAGGGGCAAC TAAAACTTAG CCATAAAGCA ACTTTAGAAT AG
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| Protein sequence | MAFETFSVAL DKDKTLIFET GKIARQANGA VLVKMNETWV FSSACAASLS EAVDFLPFRV
DYQEKFSSAG KTSGGFLKRE GRPSEKEILI SRLIDRSLRP SFPNRLMQDI QVLSYVWSYD
GKTLPDPLAI CGASAALAIS EVPQNCIVAG VRVGLVEGKW VVNPTKDELD ASKLDLVMAG
TASAVLMIEG HCDFLTEEQV LEAIAFGQKY IAKICDAIEA WQKAIGKEKQ LSAVLDLPED
VQNVVSNFIR EKFEKALSFR DRDALEQVSK ELEESVVANL VQEESDFSLL NVKAAFKNAK
SNQMRALIRD LGIRVDGRST TEIRPISIEV SFLPRTHGSC LFTRGETQSV AVCTLGGESM
AQRFEDLNGD GAARFYLQYF FPPFSVGEVG RIGSPGRREI GHGKLAEKAL SHVLPEASRF
PYTVRVESNI TESNGSSSMA SVCGGCLSLM DAGVPIKAPV AGIAMGLILD QDKAIVLSDI
SGIEDHLGDM DFKVAGTEEG ITAFQMDIKV EGITHEIMEQ ALAQAKQGRS HILNLMTQVM
SSPNDSVSRY APRIETMQIN TSKIATVIGP GGKQIRQIIE RSGAQVDIND NGLINISANT
QESIDKAKEL IEGLTGEVEV GKIYNGRVTS VVAFGAFVEV LPGKEGLCHI SELSKQKVDN
VADFVKEGDR LAVKLLSINE KGQLKLSHKA TLE
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