Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TC0189 |
Symbol | |
ID | 1246315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlamydia muridarum Nigg |
Kingdom | Bacteria |
Replicon accession | NC_002620 |
Strand | - |
Start bp | 220353 |
End bp | 221705 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637060986 |
Product | hypothetical protein |
Protein accession | NP_296568 |
Protein GI | 15834809 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00928338 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTTTGC CTTACTATTC CTCAGGATTA CGCATTGGAT CTGCCGTTCT ATTTTTTTCT GCAGTGATCC ATACTTTTCT TACTCCATGG TTAACGCGAC TATATGAGGA ATGTCTGCAT AAAAAGATGA TTTTTCCAGA ACGCTGGCGT CAATACCTTT GGTTAAGTGA ACTTCTTCGT ATTGTTAGCC GCGTTGAATT AGTGTTTGTG CTTTGGGCGA TCCCTCTGTT TTTTTTATTT TTGTATACAG AGGGGTATCG CGTAACAATG GCCTACTTCG ATAGCCGTAA CTACGTATTC TCTCTTTTTA TTGTTGTTAT GCTGATTCTT CTCGAATCAC GTCCTATCGA ATATTTATCC CAAAGAATCT TTTCATCAGT CGCTAAAATT GGAAAGCAGT CTCCGATTTG TTGGTGGTGG ACCATTATGA TTGCAGCACC ACTATCTACT TTCTTCCTTA AAGAATCCGG GGCAATGATT ATTGCTGCGA CACTACTGTC AAAACACTTT TATCAACTCG CACCATCTCC CAAGTTTTGC TATGCAACTA TGGGATTACT CTTTTCTAAT ATTTCGATTA GTGGATTGAC TTCATCTTTC TCATCTCGAG CACTACTCAC TATTCTTCCA GAAATTAAAT GGACGAGTAG TTTCATTATC ACCCATTTCT GTTGGAAAGT CATTTTAGCT GTCCTTATCT CCACAACGAT TTTTTTCTTA TTCTTCCGCA AGGAATTCAA AAAATTTCCT AAGACAATTC CAAGTTCAAC CATAATGCAG AATCGAGTCC CTTATTGGAC TATTTTCATT CATGTTGTCT TGGTTGGATG TGTCATTCTC AGCCGAGCAA TTCCTTTGTT TTTGGGCTTT ATTCTTGTTT TCTACTTAGG GTTTCAACGC TTCACTATTT TTTATCAAAA CCCAATCAAA ACAGCGAAAG TCTGCTTTGT AGGATTATTT TATGCAGGGG TAGTGATTTT CGGAGAACTT CAAGAATGGT GGATGCTTGA TTTAATGCAC GGTATGTCAG ACTTTGGCTA TATGATGACC TCATATATGT TTTCTATATT CTTAGATAAT GCCTTAGTAA ACCATATTGT GCATAACCTC CCCATGGCTA ATGATTGCTA TCTATATCTG GTACTTGTTG GAAGTATGTC TGCAGGAGGA TTAACACTTG TGTCCAACAT GCCTAATATT GTTGGATACC TTATTCTTAG ACCGACTTTC CCCCAATCAG ATATCTCTTT AATTAGACTA TTTTGGTCAG CATTGATCCC CTCTATTGTA TCCTTAAGTA TTTTTTGGCT TCTTAGAGGA ATCCCCTCAT TTATGTTTTG TTTATTTCGC TGA
|
Protein sequence | MILPYYSSGL RIGSAVLFFS AVIHTFLTPW LTRLYEECLH KKMIFPERWR QYLWLSELLR IVSRVELVFV LWAIPLFFLF LYTEGYRVTM AYFDSRNYVF SLFIVVMLIL LESRPIEYLS QRIFSSVAKI GKQSPICWWW TIMIAAPLST FFLKESGAMI IAATLLSKHF YQLAPSPKFC YATMGLLFSN ISISGLTSSF SSRALLTILP EIKWTSSFII THFCWKVILA VLISTTIFFL FFRKEFKKFP KTIPSSTIMQ NRVPYWTIFI HVVLVGCVIL SRAIPLFLGF ILVFYLGFQR FTIFYQNPIK TAKVCFVGLF YAGVVIFGEL QEWWMLDLMH GMSDFGYMMT SYMFSIFLDN ALVNHIVHNL PMANDCYLYL VLVGSMSAGG LTLVSNMPNI VGYLILRPTF PQSDISLIRL FWSALIPSIV SLSIFWLLRG IPSFMFCLFR
|
| |