Gene TC0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTC0178 
SymbolglyQS 
ID1246303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlamydia muridarum Nigg 
KingdomBacteria 
Replicon accessionNC_002620 
Strand
Start bp210710 
End bp213721 
Gene Length3012 bp 
Protein Length1003 aa 
Translation table11 
GC content42% 
IMG OID637060974 
Productglycyl-tRNA synthetase, tetrameric type, alpha/beta subunits 
Protein accessionNP_296557 
Protein GI15834798 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0751] Glycyl-tRNA synthetase, beta subunit
[COG0752] Glycyl-tRNA synthetase, alpha subunit 
TIGRFAM ID[TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit
[TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTCAC AACCTTTAAC TCTTCAAGAC ATGATGGCGG CTATTTTACG TTTTTGGAGC 
GAACAAGGCT GCATCATTCA TCAAGGATAT GATTTGGAAG TTGGGGCGGG GACATTTAAC
CCAGCGACCT TTCTTCAGGC ATTAGGACCA GAGCCTTTTA AAACAGCTTA TATTGAACCT
TCTCGACGTC CACAAGATGG CCGTTATGGG CAGCATCCTA ATCGCTTGCA GAAATACCAC
CAATTACAAG TGATCCTCAA GCCCGTTCCC GAAAATTTCC TTTCTCTTTA TTTGGAATCG
CTCAAAGTCA TCGGATTAAA TTTAGTTGAC CATGACATTC GTTTTGTCCA CGACGACTGG
GAAAATCCAA CTATTGGAGC TTGGGGACTA GGATGGGAAG TATGGTTAAA TGGCATGGAA
ATTACACAGC TCACCTATTT CCAAGCAGTA GGAAGCAAGC CTCTAGAGGC AATTAGCGGG
GAAATTACGT ATGGCGTTGA GCGTATCGCA ATGTATCTCC AGAAAAAAAA CTCTGTCTAT
GATGTCATGT GGAATGATTC CTTAACCTAT GGAGATATTA CACAACATGC AGAGCAGGCC
TGGAGTCAAT ACAATTTTGA AACCGCAAAT ACTTCTATGT GGTTAAAACA TTTTGAAGAC
TTCGCGGCGG AAGCTTTAGC TACGCTAGAC AAAGGACTCC CTCTCCCTGC TTATGATTTT
GTCATTAAAG CCTCTCATGC ATTTAATATG CTCGATTCCC GAGGGGTGAT TTCTGTAACC
GAACGCACCC GATATATCAC TAAAATCCGT CAATTAGCCC GTGCTGTTGC AGATAAATAC
GTAATATGGA GAGAGTCGCT AGGATTTCCT CTTCTTAAAA CAATTCCTTC TACTCCAACA
GTAACGGCTA AACAAATCCC TCATATTTGC CAAGACGAAG ACTTCTTACT TGAAATTGGA
AGTGAAGAAC TCCCAGCAGC CTTTGTTCCT ACTGGAATTC AGCAATTAGA ATCACTAGCT
AAAAAACTTC TTGCTGACCA TAACATCTCC TATAACAATC TAGAAGTACT CGGAACTCCT
CGACGACTAG CATTACGTAT ACAAGGCCTG AGCCACCTAA CGATTCGCCC AGAAGCAGAG
AAAAAAGGAC CTCCTCTTTC CCTTTTGTTT GAGGAAGATG GCTCCGTATC CTCTCAAGGA
GAGCAGTTTT TTGCCTCTCA TGGATTATCC ATTTCCCATC GAAGTGCCTT AGATCAGTCT
TCCACGATCT GCCGAGTTCG TTCCATTAAA GGAACTGATT ATCTATTCCT TGTTATCCCA
GAAGAGCGTA TAGAGACTGC AGCGATTCTT GTAAATGAGC TTCCTCTATT GATTCGATCT
ATGCGCTTCC CTAAAAAAAT GACCTGGGAT AATGGAGGGG TAGAATATGC TCGTCCTATT
CGCTGGTTAG TTGCTCTGTA TGGAGATCAG GTGCTTCCTA TATCTCTAGG ATTCGTTTCA
TCAGGGAATA TTTCTTGGGG ACATCGACAA TTGGACAACC GTCAGTTGAC CATCCCATCC
AGCAAAGAAT ACATTGATAT TTTGCGAGAT GCCTGTGTCA TTGTTTCCCA AAAAGAACGC
CGATCGATCA TTGAACAAGG ACTGCAAAAT CTAACAGGAG ATCAAACTGT TGCTATAGCT
CCGGAACATC TTATAGAAGA AACCGTCTTC TTAACAGAAC ATCCGTTTGT AATCTGTGCC
CAGTTTAATC CTGATTTTTG CTCTCTACCC AAAGAGCTCT TAATAGCAGA AATGATTAAT
CACCAACGCT ATTTCCCAAC ACAGAACTTG CAAGGAGAGA TCACCAACCG ATTTTTAATC
GTTTGCGATA ACTCTCCTAC TGATACCATT ATTGAAGGGA ATGAAAAAGC CTTGGCTCCA
CGTCTTACCG ACGGGAACTT CTTGTTTAAA CAAGACCTTC TTACTTCTTT AGACTCTTTC
GTAGAAAAAT TGAAATCTGT AACGTACTTT GATGCTTTAG GTAGTTTAGC TGATAAAACC
GCACGATTGA AATTACACTT AGAAGAGACC TATCCCCTTC TTCCTTTATG TCCTAAAGAA
GACATTGACA CCGCTGTTCA TTACTGCAAA GCAGACCTCG TATCTGCTGT AGTCAATGAA
TTCCCTGAAT TACAAGGAAT CATGGGTAGA TATTATTTGC AGAACGCTGC TTTATCTAAA
GCTGCTGCGA TTGCTGTTGG AGAACACCTC CAACACATTA CCCTAGGATC AAGTGTCTCT
ACAACAGGCG CTTTATTAAG CATCCTCGAT CGAGTAGACA ATCTTCTCTC TTGCTTCATC
CTAGGACTAC TCCCCACATC CTCCCATGAC CCTTACGCTT TGCGACGACA ATCACTAGAG
CTTCTCACCC TGCTCTATAC AACACAGAGC TCTGTAGACA TAGAAGATCT ATTTTCTCGT
CTTGTTCGAC ATTTCCCTAC TACTATTCCG AATACGGTAT GGTCTCCTGA GGATGTTTTA
AACAAACTCT GTTCTTTTGT TTGGGGACGA TTAAAAACAA TTTTATCATC TCTAGGATTT
GCTAAAGAGG TTATTGCTGC AGTTCTCACT GAAAATTGTC CAAAAAATCC TTTAACTATC
ATCAATAGCG CTCGGTCTAT CCAAGAACTG CAAAACACAC AGACATTGGA AACTATTGCA
TCGACACACA ATCGATTAAA GAAAATTCTA GCTTCTCTAT CTTTCTCTGT TACAGAACAA
ATATTCTCTC TCATAACTTC AGAGGACATG TTGTTCAAGC AAGCTTTGGA GCGATTTAAA
GAAGCGACAA CTTCTCTTCC AATTAGCTCT CGAGAATATC TACTCCAGTT AGAAGATTTA
TCTCAAAGCA CCGCGCTCTT TTTAGACTCT GTACGCATTG CTGATGACGA TGAAAACATC
CGCAACCAAC GCATTGCGTT GTTAGTAGCA ACTCAAAAAT GTTTTGGATT CTATGCTTGG
GATGCTCTGT AA
 
Protein sequence
MSSQPLTLQD MMAAILRFWS EQGCIIHQGY DLEVGAGTFN PATFLQALGP EPFKTAYIEP 
SRRPQDGRYG QHPNRLQKYH QLQVILKPVP ENFLSLYLES LKVIGLNLVD HDIRFVHDDW
ENPTIGAWGL GWEVWLNGME ITQLTYFQAV GSKPLEAISG EITYGVERIA MYLQKKNSVY
DVMWNDSLTY GDITQHAEQA WSQYNFETAN TSMWLKHFED FAAEALATLD KGLPLPAYDF
VIKASHAFNM LDSRGVISVT ERTRYITKIR QLARAVADKY VIWRESLGFP LLKTIPSTPT
VTAKQIPHIC QDEDFLLEIG SEELPAAFVP TGIQQLESLA KKLLADHNIS YNNLEVLGTP
RRLALRIQGL SHLTIRPEAE KKGPPLSLLF EEDGSVSSQG EQFFASHGLS ISHRSALDQS
STICRVRSIK GTDYLFLVIP EERIETAAIL VNELPLLIRS MRFPKKMTWD NGGVEYARPI
RWLVALYGDQ VLPISLGFVS SGNISWGHRQ LDNRQLTIPS SKEYIDILRD ACVIVSQKER
RSIIEQGLQN LTGDQTVAIA PEHLIEETVF LTEHPFVICA QFNPDFCSLP KELLIAEMIN
HQRYFPTQNL QGEITNRFLI VCDNSPTDTI IEGNEKALAP RLTDGNFLFK QDLLTSLDSF
VEKLKSVTYF DALGSLADKT ARLKLHLEET YPLLPLCPKE DIDTAVHYCK ADLVSAVVNE
FPELQGIMGR YYLQNAALSK AAAIAVGEHL QHITLGSSVS TTGALLSILD RVDNLLSCFI
LGLLPTSSHD PYALRRQSLE LLTLLYTTQS SVDIEDLFSR LVRHFPTTIP NTVWSPEDVL
NKLCSFVWGR LKTILSSLGF AKEVIAAVLT ENCPKNPLTI INSARSIQEL QNTQTLETIA
STHNRLKKIL ASLSFSVTEQ IFSLITSEDM LFKQALERFK EATTSLPISS REYLLQLEDL
SQSTALFLDS VRIADDDENI RNQRIALLVA TQKCFGFYAW DAL