Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TC0125 |
Symbol | alaS |
ID | 1245659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlamydia muridarum Nigg |
Kingdom | Bacteria |
Replicon accession | NC_002620 |
Strand | - |
Start bp | 152540 |
End bp | 155167 |
Gene Length | 2628 bp |
Protein Length | 875 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637060921 |
Product | alanyl-tRNA synthetase |
Protein accession | NP_296508 |
Protein GI | 15834749 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAGCA ACACTCTTCG ATCCAACTTC CTAAAATTCT ATACTAACAG GAATCACACT CCTGTCGCAT CTTCTCCCGT TTTCCCATAT AATGATCCCT CGATTCTTTT TACAAACGCT GGGATGAACC AATTCAAGAA TATCTTTTTA GGGAAAGAAC AAACTAGTTA CACAAGGGCA ACGACTTCAC AAAAATGTAT TCGTGCTGGG GGAAAACATA ATGATTTAGA GAATGTTGGG CACACATCCC GACATCTCAC TTTTTTTGAA ATGCTAGGAA ATTTTTCCTT CGGGGATTAC TTTAAACAGG ATGCTATTTC TTTTGCTTGG GAAGTCTCTC TTTCTGTTTT TAACTTTGAT CCTGATTTTA TTTATGCCAC TGTGCATGAA AAAGATGATG AAGCCTTCGC TCTTTGGGAA AAATATCTTC CAACCAATAG AATTTTCCGC CTAACAGATA AAGATAATTT TTGGAGCATG GCAGATACCG GTCCTTGCGG ATTCTGCTCT GAACTTTTAT TTGATCGGGG AGAGAAATTT GGAAAAGCAA CCTCTCCTCT TGAGGATGCT GATGGGGAGC GATTTTTAGA ATACTGGAAT CTAGTATTCA TGGAATTTAA CAGGACTTCT GATGGAACAC TTCTAGCTTT ACAGAAAAAG TGTGTCGATA CCGGAGCTGG ATTAGAGCGC TTGGTTTCTT TATTATCTGA AACAGATACT GTATTCGAAG CGGATGTTTT GAGACACCTC ATTGCTAAAG TAGAAAATTT ATCTGAAATA ACCTACTCAC CAACGGAATC AAAAGGCTCT GCTTTCCGAG TTATAGCAGA TCATGTACGT TCCCTTTCTT TCGCAATAAC TGACGGACTT TTACCAGGCA ACACTGAGCG TGGGTATGTT TTAAGAAAAA TTCTTCGTCG TGCTGTAAAT TACGGGAAAC GCCTTGGATT TCATCGACCG TTTCTGGCGG AGATTGTGCC TTCACTAATA GAGACGATGG GCGAAGCTTA TCCCGAACTC CAAGCAGCCG AGACACAAAT TCAAGAAGTA CTCACCACTG AAGAAGAACA TTTCTTCAAA ACATTACAAC GTGGGGGGAA TCTTCTTCAT CAAGTACTAA AATCTTCGGC GTCTTTATCG AAAATTTCTG GAGAAGATGC CTTCAAACTC AAAGATACTT ATGGGCTACC CATCGATGAA ATTGCGCTAC TAGCGAAAGA CCATAACTAC ACCGTAGATA TGGACACTTT CAGAAAACTA GAAATGGAAG CAAAAGAACG CTCTCGCAAA AACACTGTTA AAAACAAAAA TGACAGCGAT TCCATTTTTC AAGATGTAGA TCCAACTAAC ACGTCCGAAT TCGTGGGATA CGATATGCTT TCCTGCGATA CTTTCATTGA AGGAATTGTC AAATATAATG AGATTGCTTC AACTTTGGAA GAAGGCGAGG AAGGAGCAAT CATTCTACGT ACCACACCAT TTTATGCAGA GAAAGGTGGT CAAGTCGGAG ATTCTGGGGA AATCTTCTGC GAATCTGGAA CCTTCTTAGT TTCTCATACA ACAACTCCCA AAGCCGGACT GATTGCGCAT CATGGGAAAC TTTCTCAAGG AAGCTTACAG ACAACAATGG CTGTCACAGC ACAAGTAAAC CAAAATCTTC GAAAAAAAAT AGCTAACAAT CATACCGGGT GCCATCTGTT ACACAAAGCT CTTGAGGTAT CTCTTGGGGA ACATATTCGC CAAGCCGGTT CCTATGTAGA CTCCCAAAAA ATTCGTTTAG ATTTTTCCCA TAATAAAGCG CTTTCTCCAG AGGAGCTTTT AACCATAGAA ACCCTTGTTA ACGAGAAAAT CCGAGAAAAC GTTCCCGTAA CAATTCGTGA AGCTTTGTAC TCTGATGTAA TGAATTCTTC TGAAATCAAA CAATTCTTTG GAGATAAATA CGGAGACATT GTCCGTGTGG TTTCTGCTGG ATTCTCTCAT GAATTATGCG GAGGAACGCA CGCTCGAGCG ACTGGAGACA TTGGTTATTT CAGAATCACT AAAGAACATG CTGTTTCAAC GGGGATACGC CGTATAGAAG CAACGACAGG GGAAGACGCA GAAAATATTG CTCGTGGACA AGATACCGAT TTGAATGAAA TAGCAACCAT TATTCAATCT CCCAAGGATC AACTCCTTGT CAAACTCCGT AATGTTATGG AAGAAAAGAA AGATTTAGCC AAACAACTGG CTAACCTGGA GAATCAACTT GTCCAACAGC AGGTAAAAAG CTTATTAACC TCCTGCGACA AAGTCAACGA AACCTCTTAC TTAGTTTACC ATCTAACAGA AGAGGAAGGA CAAAGAATCC AGCATTATGC CAATACTCTG CATAAAGAAG TCCCAGCAAA ATTCATTTCT TTATGGGTAA CAGAGAAGAA TGACCGCTAT ATTGTCTTAG TCAGAGTTTC TGATGATTTG GTAAAACAAG GAATTGACGC TCAAGCCTTA CTTGAAGAAT TGCTAGCTCC GTACGGAGGC CGTTGCGGAG GTAAAGCTGT TTCCGCTCAA GGAAGTTCCA AAGAACTCCC TCAAATAGAA GTTCTTAACA CAATTTTAAG ACAATGGATT TCGACCCGAC TAGCATAA
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Protein sequence | MLSNTLRSNF LKFYTNRNHT PVASSPVFPY NDPSILFTNA GMNQFKNIFL GKEQTSYTRA TTSQKCIRAG GKHNDLENVG HTSRHLTFFE MLGNFSFGDY FKQDAISFAW EVSLSVFNFD PDFIYATVHE KDDEAFALWE KYLPTNRIFR LTDKDNFWSM ADTGPCGFCS ELLFDRGEKF GKATSPLEDA DGERFLEYWN LVFMEFNRTS DGTLLALQKK CVDTGAGLER LVSLLSETDT VFEADVLRHL IAKVENLSEI TYSPTESKGS AFRVIADHVR SLSFAITDGL LPGNTERGYV LRKILRRAVN YGKRLGFHRP FLAEIVPSLI ETMGEAYPEL QAAETQIQEV LTTEEEHFFK TLQRGGNLLH QVLKSSASLS KISGEDAFKL KDTYGLPIDE IALLAKDHNY TVDMDTFRKL EMEAKERSRK NTVKNKNDSD SIFQDVDPTN TSEFVGYDML SCDTFIEGIV KYNEIASTLE EGEEGAIILR TTPFYAEKGG QVGDSGEIFC ESGTFLVSHT TTPKAGLIAH HGKLSQGSLQ TTMAVTAQVN QNLRKKIANN HTGCHLLHKA LEVSLGEHIR QAGSYVDSQK IRLDFSHNKA LSPEELLTIE TLVNEKIREN VPVTIREALY SDVMNSSEIK QFFGDKYGDI VRVVSAGFSH ELCGGTHARA TGDIGYFRIT KEHAVSTGIR RIEATTGEDA ENIARGQDTD LNEIATIIQS PKDQLLVKLR NVMEEKKDLA KQLANLENQL VQQQVKSLLT SCDKVNETSY LVYHLTEEEG QRIQHYANTL HKEVPAKFIS LWVTEKNDRY IVLVRVSDDL VKQGIDAQAL LEELLAPYGG RCGGKAVSAQ GSSKELPQIE VLNTILRQWI STRLA
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