Gene TC0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTC0125 
SymbolalaS 
ID1245659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlamydia muridarum Nigg 
KingdomBacteria 
Replicon accessionNC_002620 
Strand
Start bp152540 
End bp155167 
Gene Length2628 bp 
Protein Length875 aa 
Translation table11 
GC content41% 
IMG OID637060921 
Productalanyl-tRNA synthetase 
Protein accessionNP_296508 
Protein GI15834749 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0013] Alanyl-tRNA synthetase 
TIGRFAM ID[TIGR00344] alanine--tRNA ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAGCA ACACTCTTCG ATCCAACTTC CTAAAATTCT ATACTAACAG GAATCACACT 
CCTGTCGCAT CTTCTCCCGT TTTCCCATAT AATGATCCCT CGATTCTTTT TACAAACGCT
GGGATGAACC AATTCAAGAA TATCTTTTTA GGGAAAGAAC AAACTAGTTA CACAAGGGCA
ACGACTTCAC AAAAATGTAT TCGTGCTGGG GGAAAACATA ATGATTTAGA GAATGTTGGG
CACACATCCC GACATCTCAC TTTTTTTGAA ATGCTAGGAA ATTTTTCCTT CGGGGATTAC
TTTAAACAGG ATGCTATTTC TTTTGCTTGG GAAGTCTCTC TTTCTGTTTT TAACTTTGAT
CCTGATTTTA TTTATGCCAC TGTGCATGAA AAAGATGATG AAGCCTTCGC TCTTTGGGAA
AAATATCTTC CAACCAATAG AATTTTCCGC CTAACAGATA AAGATAATTT TTGGAGCATG
GCAGATACCG GTCCTTGCGG ATTCTGCTCT GAACTTTTAT TTGATCGGGG AGAGAAATTT
GGAAAAGCAA CCTCTCCTCT TGAGGATGCT GATGGGGAGC GATTTTTAGA ATACTGGAAT
CTAGTATTCA TGGAATTTAA CAGGACTTCT GATGGAACAC TTCTAGCTTT ACAGAAAAAG
TGTGTCGATA CCGGAGCTGG ATTAGAGCGC TTGGTTTCTT TATTATCTGA AACAGATACT
GTATTCGAAG CGGATGTTTT GAGACACCTC ATTGCTAAAG TAGAAAATTT ATCTGAAATA
ACCTACTCAC CAACGGAATC AAAAGGCTCT GCTTTCCGAG TTATAGCAGA TCATGTACGT
TCCCTTTCTT TCGCAATAAC TGACGGACTT TTACCAGGCA ACACTGAGCG TGGGTATGTT
TTAAGAAAAA TTCTTCGTCG TGCTGTAAAT TACGGGAAAC GCCTTGGATT TCATCGACCG
TTTCTGGCGG AGATTGTGCC TTCACTAATA GAGACGATGG GCGAAGCTTA TCCCGAACTC
CAAGCAGCCG AGACACAAAT TCAAGAAGTA CTCACCACTG AAGAAGAACA TTTCTTCAAA
ACATTACAAC GTGGGGGGAA TCTTCTTCAT CAAGTACTAA AATCTTCGGC GTCTTTATCG
AAAATTTCTG GAGAAGATGC CTTCAAACTC AAAGATACTT ATGGGCTACC CATCGATGAA
ATTGCGCTAC TAGCGAAAGA CCATAACTAC ACCGTAGATA TGGACACTTT CAGAAAACTA
GAAATGGAAG CAAAAGAACG CTCTCGCAAA AACACTGTTA AAAACAAAAA TGACAGCGAT
TCCATTTTTC AAGATGTAGA TCCAACTAAC ACGTCCGAAT TCGTGGGATA CGATATGCTT
TCCTGCGATA CTTTCATTGA AGGAATTGTC AAATATAATG AGATTGCTTC AACTTTGGAA
GAAGGCGAGG AAGGAGCAAT CATTCTACGT ACCACACCAT TTTATGCAGA GAAAGGTGGT
CAAGTCGGAG ATTCTGGGGA AATCTTCTGC GAATCTGGAA CCTTCTTAGT TTCTCATACA
ACAACTCCCA AAGCCGGACT GATTGCGCAT CATGGGAAAC TTTCTCAAGG AAGCTTACAG
ACAACAATGG CTGTCACAGC ACAAGTAAAC CAAAATCTTC GAAAAAAAAT AGCTAACAAT
CATACCGGGT GCCATCTGTT ACACAAAGCT CTTGAGGTAT CTCTTGGGGA ACATATTCGC
CAAGCCGGTT CCTATGTAGA CTCCCAAAAA ATTCGTTTAG ATTTTTCCCA TAATAAAGCG
CTTTCTCCAG AGGAGCTTTT AACCATAGAA ACCCTTGTTA ACGAGAAAAT CCGAGAAAAC
GTTCCCGTAA CAATTCGTGA AGCTTTGTAC TCTGATGTAA TGAATTCTTC TGAAATCAAA
CAATTCTTTG GAGATAAATA CGGAGACATT GTCCGTGTGG TTTCTGCTGG ATTCTCTCAT
GAATTATGCG GAGGAACGCA CGCTCGAGCG ACTGGAGACA TTGGTTATTT CAGAATCACT
AAAGAACATG CTGTTTCAAC GGGGATACGC CGTATAGAAG CAACGACAGG GGAAGACGCA
GAAAATATTG CTCGTGGACA AGATACCGAT TTGAATGAAA TAGCAACCAT TATTCAATCT
CCCAAGGATC AACTCCTTGT CAAACTCCGT AATGTTATGG AAGAAAAGAA AGATTTAGCC
AAACAACTGG CTAACCTGGA GAATCAACTT GTCCAACAGC AGGTAAAAAG CTTATTAACC
TCCTGCGACA AAGTCAACGA AACCTCTTAC TTAGTTTACC ATCTAACAGA AGAGGAAGGA
CAAAGAATCC AGCATTATGC CAATACTCTG CATAAAGAAG TCCCAGCAAA ATTCATTTCT
TTATGGGTAA CAGAGAAGAA TGACCGCTAT ATTGTCTTAG TCAGAGTTTC TGATGATTTG
GTAAAACAAG GAATTGACGC TCAAGCCTTA CTTGAAGAAT TGCTAGCTCC GTACGGAGGC
CGTTGCGGAG GTAAAGCTGT TTCCGCTCAA GGAAGTTCCA AAGAACTCCC TCAAATAGAA
GTTCTTAACA CAATTTTAAG ACAATGGATT TCGACCCGAC TAGCATAA
 
Protein sequence
MLSNTLRSNF LKFYTNRNHT PVASSPVFPY NDPSILFTNA GMNQFKNIFL GKEQTSYTRA 
TTSQKCIRAG GKHNDLENVG HTSRHLTFFE MLGNFSFGDY FKQDAISFAW EVSLSVFNFD
PDFIYATVHE KDDEAFALWE KYLPTNRIFR LTDKDNFWSM ADTGPCGFCS ELLFDRGEKF
GKATSPLEDA DGERFLEYWN LVFMEFNRTS DGTLLALQKK CVDTGAGLER LVSLLSETDT
VFEADVLRHL IAKVENLSEI TYSPTESKGS AFRVIADHVR SLSFAITDGL LPGNTERGYV
LRKILRRAVN YGKRLGFHRP FLAEIVPSLI ETMGEAYPEL QAAETQIQEV LTTEEEHFFK
TLQRGGNLLH QVLKSSASLS KISGEDAFKL KDTYGLPIDE IALLAKDHNY TVDMDTFRKL
EMEAKERSRK NTVKNKNDSD SIFQDVDPTN TSEFVGYDML SCDTFIEGIV KYNEIASTLE
EGEEGAIILR TTPFYAEKGG QVGDSGEIFC ESGTFLVSHT TTPKAGLIAH HGKLSQGSLQ
TTMAVTAQVN QNLRKKIANN HTGCHLLHKA LEVSLGEHIR QAGSYVDSQK IRLDFSHNKA
LSPEELLTIE TLVNEKIREN VPVTIREALY SDVMNSSEIK QFFGDKYGDI VRVVSAGFSH
ELCGGTHARA TGDIGYFRIT KEHAVSTGIR RIEATTGEDA ENIARGQDTD LNEIATIIQS
PKDQLLVKLR NVMEEKKDLA KQLANLENQL VQQQVKSLLT SCDKVNETSY LVYHLTEEEG
QRIQHYANTL HKEVPAKFIS LWVTEKNDRY IVLVRVSDDL VKQGIDAQAL LEELLAPYGG
RCGGKAVSAQ GSSKELPQIE VLNTILRQWI STRLA