Gene TC0105 details

Gene Information

• Locus tag: TC0105
• Symbol: ribH
• ID: 1245635
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: +
• Start bp: 124310
• End bp: 124783
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637060898
• Product: 6,7-dimethyl-8-ribityllumazine synthase
• Protein accession: NP_296489
• Protein GI: 15834730
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0054] Riboflavin synthase beta-chain
• TIGRFAM ID: [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTGT TGAAAGGACT TCCTGTTGCT AAGGATGTGC GTGTAGCTAT AGTCGGGGCG 
TGCTTTAACG CTCCTATTGC TGATCGCTTG GTTTCCGGAG CTCGAGAGAC ATTTTTTGAG 
TCCGGAGGTA GTCCCGATTC TTTGACTGTT GTTCGAGTTC CCGGTGCTTT TGAAATTCCC 
TGTGCCATTA AAAAAATGCT CTCTAAAGGA AATCTTTTTC AAGCAATTGT TGCCTGTGGA 
GTCTTAATTC AGGGGGAAAC TTCGCATTAT GAGCATATTG CGGATAATGT TGCCGCAGGT 
ATCGCTCGAT TGTCTGTAGA ATTCTGTCTC CCAATCACTT TTTCTGTGAT TACTGCTCCT 
AATGTAGAAG CTGCTTGGGA AAGAGCAGGG ATAAAAGGCC CAAATTTGGG AGCTTCAGGA 
ATGAGAACGG CGTTAGAAAT GGCGTCGCTG TTTTCATTAA TAGAGAAAGA ATAA 

 

Protein sequence

MKLLKGLPVA KDVRVAIVGA CFNAPIADRL VSGARETFFE SGGSPDSLTV VRVPGAFEIP 
CAIKKMLSKG NLFQAIVACG VLIQGETSHY EHIADNVAAG IARLSVEFCL PITFSVITAP 
NVEAAWERAG IKGPNLGASG MRTALEMASL FSLIEKE