Gene TC0103 details

Gene Information

• Locus tag: TC0103
• Symbol: ribG
• ID: 1245633
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: +
• Start bp: 121759
• End bp: 122949
• Gene Length: 1191 bp
• Protein Length: 396 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637060896
• Product: riboflavin-specific deaminase
• Protein accession: NP_296487
• Protein GI: 15834728
• COG category: [F] Nucleotide transport and metabolism; [H] Coenzyme transport and metabolism; [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0590] Cytosine/adenosine deaminases; [COG1985] Pyrimidine reductase, riboflavin biosynthesis
• TIGRFAM ID: [TIGR00227] riboflavin-specific deaminase C-terminal domain; [TIGR00326] riboflavin biosynthesis protein RibD

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGTTCCTT GCGTATTAAT CGTATATCCA ACATCCTTGC ATCTCTTTCG CTATCTGATT 
TTTCAGGTTG AGTATATGGA AGTTTCGTCT GAGCAACAAC TGTTTTTTAT GCGCGAGGCC 
GTTGCATTAG GTGAAAGGGG GAGGATTTTT GCTCCCCCTA ATCCTTGGGT GGGGTGTGTG 
ATTGTAAAAA ATGGATGTAT AATAGGAAGA GGGTGGCACA AAGGAATTGG GTCCCCGCAT 
GCGGAAGTTT GTGCTTTCCA AGATCAAACT AGCTCATTGG TAGGAGCAGA TGTGTATGTC 
ACCTTAGAGC CTTGCTGCCA TTTTGGTAGG ACTCCCCCCT GCGTAGATCT TTTGATCAAA 
AGTAAGGTGT CGTCAGTTTA TATTGCTCTG CTAGATCCTG ACCCTCGTGT TTGTAAAAGG 
GGGGTTGCTC GTCTGAAGGA GGCGGGAATT TCTGTTTATG TGGGGATAGG TCACGAAGAA 
GCAAAGGCTT CCTTGCAACC GTACTTGCAT CAAAGAGAAA CGGGGTTGCC ATGGGTTGTT 
ATGAAAACGG CCGCGTCTCT CGATGGTCAA ACCTCGGATC GTAGAGGGAT ATCGCAATGG 
ATTTCAGGAG AGCAGGCTCG GTTAGATGTA GGAAGACTTC GTGCTGAGTC CCAAGCTGTA 
ATTGTCGGTT CGCGTACGGT GTGTTTAGAT AATCCTCGTT TATCTGCTCG GATGCCTTCA 
GGGGATTTGT ACGAGAGACA ACCGTTACGA GTAGTGGTGG ATAGCAGAGG GAGTGTTCCT 
TTAGATGCTC GGGTATGGAA TCCAGATTCT GGAAATGTTT TGCTTGCTAC AACGGAACAG 
TGCTCTAAGG AGCATATTCA AAAATTAGAA GATCGGGGAG TGGAGGTATG GAAATCTTCT 
CCCCAGCAGG TGGATCTCAA AAGACTTTTA CAATATCTGG CAGAGAAAGG ATGTCTACAA 
GTGCTTGTTG AAGGGGGGGC TCGGTTGCAC TCCGCTTTCT GGCGTGAGCA TCTTGTGAAC 
GCAGGTGTGA TCTATTGGGG CCCCAAATTT TTGGGGGATC AAGGTAGTCC TATGTTACGA 
GATCTTCAGT TATGTTTGGA TAATGCAGAA CATGTGAAAA TCACAAAAAC TTTTTTAGTT 
GGAGATTCTG TAAAGACATG TTTTGAATGC GTGGGGAGAG AGGATGGATA G 

 

Protein sequence

MVPCVLIVYP TSLHLFRYLI FQVEYMEVSS EQQLFFMREA VALGERGRIF APPNPWVGCV 
IVKNGCIIGR GWHKGIGSPH AEVCAFQDQT SSLVGADVYV TLEPCCHFGR TPPCVDLLIK 
SKVSSVYIAL LDPDPRVCKR GVARLKEAGI SVYVGIGHEE AKASLQPYLH QRETGLPWVV 
MKTAASLDGQ TSDRRGISQW ISGEQARLDV GRLRAESQAV IVGSRTVCLD NPRLSARMPS 
GDLYERQPLR VVVDSRGSVP LDARVWNPDS GNVLLATTEQ CSKEHIQKLE DRGVEVWKSS 
PQQVDLKRLL QYLAEKGCLQ VLVEGGARLH SAFWREHLVN AGVIYWGPKF LGDQGSPMLR 
DLQLCLDNAE HVKITKTFLV GDSVKTCFEC VGREDG