| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0078 |
|---|
| Symbol | clpX |
|---|
| ID | 1245607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlamydia muridarum Nigg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002620 |
|---|
| Strand | - |
|---|
| Start bp | 90884 |
|---|
| End bp | 92143 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637060871 |
|---|
| Product | ATP-dependent protease ATP-binding subunit ClpX |
|---|
| Protein accession | NP_296462 |
|---|
| Protein GI | 15834703 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.574275 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAA AAAATCTTGC GATCTGTTCT TTTTGTGGGC GATCTGAGAA GGATGTTGAG
AAACTCATCG CTGGTCCATC GGTCTACATT TGTGACTATT GTATTAAACT GTGCTCCGGG
ATTTTGGATA AAACTCCAAC TCCCGCAGCA CAAGAGGTCT CAACATCTCA AACAGCACCT
CAGACAAGTC TGAAAGTGTT AACTCCTAAA GAGATCAAAC GCCACATAGA CTCCTATGTT
GTTGGGCAAG AACGTGCCAA AAAAACGATT TCGGTCGCTG TCTATAATCA CTATAAGCGG
ATCCGAGCCC TCATGCAGGA TAAGCAGGTC AGTTATGGGA AATCCAATGT ATTGTTGCTA
GGCCCAACGG GATCAGGGAA GACTCTGATT GCCAAAACGT TAGCAAAAAT TTTGGATGTC
CCATTTACGA TCGCGGATGC AACAACCTTA ACAGAAGCTG GTTATGTAGG AGAAGACGTA
GAAAATATTG TCTTACGCCT CCTGCAAGCA GCGGATTATG ATGTAGCCCG CGCAGAGCGT
GGAATTATTT ACATCGATGA GATCGATAAA ATTGGTCGCA CAACAGCTAA TGTTTCTATC
ACTCGAGATG TTTCTGGAGA AGGAGTCCAA CAGGCTCTTT TGAAAATCAT AGAAGGCACC
GTTGCTAACA TCCCGCCTAA AGGGGGAAGA AAGCACCCTA ACCAGGAATA TATTCGTGTA
AATACGGAAA ATATTCTTTT CATTGTGGGA GGAGCTTTCG TTAATTTGGA TAAAATTATT
GCTAAAAGAC TAGGCAGAAC GACCATAGGA TTTTCCGAAG AAACAGATCT TGCTGTCACT
GATCGCGATC GTCTTCTCGC AAAAGTAGAA ACAGAAGATT TAATCGCATT TGGAATGATC
CCAGAATTTA TTGGCCGATT TAACTGTATT GTCAATTGCG AGGAGCTTAC CCTAGATGAG
CTCGTTGAAA TTCTTACTGA GCCAGCTAAC GCTATTGTTA AGCAATATAC AGAGTTATTC
GCAGAAGAAA ACGTAAAGTT AATTTTCGAA AAAGAAGCTC TTTATGCTAT AGCGCAAAAA
GCGAAGCAAG CAAAGACAGG AGCCCGTGCT TTAGGAATGA TTCTAGAGAA TCTTCTTCGA
GATCTTATGT TCGAAATACC ATCTGATCCT ACGGTGGAAT CTATTCGCAT AGAGGAAGAC
ACTATTACGC AAAACAAATC TCCTGTAATT ATTCAAAGAT CTCCAGAGGC TATTGCTTAA
|
|---|
| Protein sequence | MTKKNLAICS FCGRSEKDVE KLIAGPSVYI CDYCIKLCSG ILDKTPTPAA QEVSTSQTAP
QTSLKVLTPK EIKRHIDSYV VGQERAKKTI SVAVYNHYKR IRALMQDKQV SYGKSNVLLL
GPTGSGKTLI AKTLAKILDV PFTIADATTL TEAGYVGEDV ENIVLRLLQA ADYDVARAER
GIIYIDEIDK IGRTTANVSI TRDVSGEGVQ QALLKIIEGT VANIPPKGGR KHPNQEYIRV
NTENILFIVG GAFVNLDKII AKRLGRTTIG FSEETDLAVT DRDRLLAKVE TEDLIAFGMI
PEFIGRFNCI VNCEELTLDE LVEILTEPAN AIVKQYTELF AEENVKLIFE KEALYAIAQK
AKQAKTGARA LGMILENLLR DLMFEIPSDP TVESIRIEED TITQNKSPVI IQRSPEAIA
|
|---|
| |