Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TC0040 |
Symbol | sctN |
ID | 1245565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlamydia muridarum Nigg |
Kingdom | Bacteria |
Replicon accession | NC_002620 |
Strand | + |
Start bp | 44843 |
End bp | 46171 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637060829 |
Product | type III secretion system ATPase |
Protein accession | NP_296424 |
Protein GI | 15834665 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family [TIGR02546] type III secretion apparatus H+-transporting two-sector ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAGC TAACGACCGA GTTTGATACG CTCATGACTG AATTGCCAGA AGTTCAATTG ACGGCAGTTG TTGGGCGTAT TATCGAAGTT GTCGGGATGT TAATCAAAGC TGTCGTTCCG GATGTTCGGG TGGGCGAAGT TTGCCTGGTG AAACGTCATG GAATGGAGCC TTTGGTAACA GAGGTTGTCG GGTTTACGCA GAACTTTGTA TTTCTCTCTC CTTTAGGAGA GTTATCTGGA GTGAGTCCTT CTTCTGAAGT GATCGCCACG GGATTGCCTT TGCACATTCG AGCAGGGGCA GGACTTTTAG GCCGTGTATT GAATGGTCTT GGAGAACCTA TTGATATAGA GACCAAAGGA CCTTTGGAGA ATGTCGATTC CATTTATCCC ATTTTTAAAG CTCCACCAGA TCCTTTGCAT CGAGAAAAAT TGCGTACGAT TCTATCTACA GGAGTGCGTT GTATAGATGG AATGCTTACT GTTGCCAAAG GACAAAGAAT CGGGATTTTT GCGGGAGCAG GGGTCGGAAA ATCTTCTTTG TTAGGCATGA TTGCTCGTAA CGCAGAAGAA GCCGATATTA ACGTGATTGC GTTAATTGGA GAGCGGGGAC GAGAAGTTCG GGAGTTTATA GAAAATGACC TTGGTGAAGA AGGAATGAAA CGTTCCGTCA TTGTGGTATC TACTTCCGAT CAATCTTCTC AGCTTCGATT GAACGCTGCT TATGTGGGAA CAGCTATAGC AGAATATTTT AGGGACCAGG GTAAGACAGT TGTGCTTATG ATGGATTCTG TGACCCGGTT TGCTCGAGCT TTACGGGAAG TAGGGCTCGC AGCTGGAGAG CCTCCTGCTC GTGCTGGGTA TACTCCTTCC GTATTTTCAA CATTGCCCAA ATTATTGGAA AGAGCGGGAG CTTCGGAGAA AGGGACTATC ACGGCATTTT ATACCGTGTT AGTTGCTGGG GATGATATGA ATGAGCCGGT GGCTGATGAG GTGAAGTCTA TTTTGGATGG GCATATCGTG CTTTCCAACG CGTTAGCTCA AGCTTATCAT TATCCTGCGA TTGATGTGCT GGCTTCTATT AGCCGATTAT TGACTGCAAT TGTTCCTGAA GAACAACGTC GAATTATTGG TCGTGCTAGG GAAGTCTTAG CGAAATATAA AGCGAACGAG ATGTTGATTC GTATTGGGGA ATATCGTCGA GGGTCTGATC GTGAGGTAGA TTTCGCGATT GACCATATTG ATAAATTGAA TCGTTTCCTC AAGCAAGATA TTCATGAAAA AACAAATTAT GAGGAAGCTG CTCAGCAGTT GAGAGCAATA TTCCGGTAA
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Protein sequence | MKELTTEFDT LMTELPEVQL TAVVGRIIEV VGMLIKAVVP DVRVGEVCLV KRHGMEPLVT EVVGFTQNFV FLSPLGELSG VSPSSEVIAT GLPLHIRAGA GLLGRVLNGL GEPIDIETKG PLENVDSIYP IFKAPPDPLH REKLRTILST GVRCIDGMLT VAKGQRIGIF AGAGVGKSSL LGMIARNAEE ADINVIALIG ERGREVREFI ENDLGEEGMK RSVIVVSTSD QSSQLRLNAA YVGTAIAEYF RDQGKTVVLM MDSVTRFARA LREVGLAAGE PPARAGYTPS VFSTLPKLLE RAGASEKGTI TAFYTVLVAG DDMNEPVADE VKSILDGHIV LSNALAQAYH YPAIDVLASI SRLLTAIVPE EQRRIIGRAR EVLAKYKANE MLIRIGEYRR GSDREVDFAI DHIDKLNRFL KQDIHEKTNY EEAAQQLRAI FR
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