Gene TCA04 details

Gene Information

• Locus tag: TCA04
• ID: 1245520
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002182
• Strand: +
• Start bp: 4703
• End bp: 5425
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637042413
• Product: virulence protein pGP3-D
• Protein accession: NP_038279
• Protein GI: 10957573

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGAAC CTCTTACAGA TCAACAAATA ATACTTGGGA CATCGACAAC TCCTGTCGCA 
GCAAAAATAA CAGCTTCTGA AGGGATATCC TTAACAATAA CAAACAATGC TCAAGCTAAC 
TCTTCAGTAA ATATTGGATT AGATGCTGAA AAAGCGTACC AACTTATTTT AGATAAGCTT 
GGCGACCAAA TCTTTGATGG AATCACAGGA TCCATAGTTG AGAGTGCTGT ACAGGACATT 
ATAGATAAGA TTACCTCGGA CCCTTCTCTA GGATTGTTGA AGGCTTTCTA TAACTTCCAA 
ATCACTGGGA AAATTCAATG TAACGGCCTA TTCACATCTA GCAATGTAAC AACTTTATTA 
GGAGGAACAG AAATAGGTAG ATTTACAGTA ACTCCTAGAA GTTCTGGAAG CATGTTTTTA 
GTTTCTGCAG ATATCATTGC ATCAAGAATG GAAGGTGGAG TTGTATTAGC CTTAGTAAAA 
GAAGGAGATA CACAACCATG TGCGATTAGC TATGGCTATT CTTCTGGTGT GCCCAATTTA 
TGTAGCTTAA AAACCTGTGT TACTAATTCC GGATCGACAC CCACAACTTA TTCATTACGA 
ATAGGAGGAT TAGAGAGCGG AGTTGTATGG GTTAATGCTC TATCCAATGG TAATGATATT 
CTTGGAATAA CAAATACTTC TAACGTTTCT TTTTTGGAGG TGATACCTCA AAAAAACACT 
TAA 

 

Protein sequence

MTEPLTDQQI ILGTSTTPVA AKITASEGIS LTITNNAQAN SSVNIGLDAE KAYQLILDKL 
GDQIFDGITG SIVESAVQDI IDKITSDPSL GLLKAFYNFQ ITGKIQCNGL FTSSNVTTLL 
GGTEIGRFTV TPRSSGSMFL VSADIIASRM EGGVVLALVK EGDTQPCAIS YGYSSGVPNL 
CSLKTCVTNS GSTPTTYSLR IGGLESGVVW VNALSNGNDI LGITNTSNVS FLEVIPQKNT