| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TCA03 |
|---|
| Symbol | |
|---|
| ID | 1245519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlamydia muridarum Nigg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002182 |
|---|
| Strand | + |
|---|
| Start bp | 2154 |
|---|
| End bp | 3509 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637042412 |
|---|
| Product | virulence plasmid helicase pGP1-D |
|---|
| Protein accession | NP_038278 |
|---|
| Protein GI | 10957567 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTA ATTCTGAAAT AGAAAACCGC ATGCAAGATA TTGAGTATGC GTTACTAGGA
AAAGCTTTGG TATTTGAAGA CTGTACAGAG TACATTCTTA GGCAACTTGT TAATTACGAA
TTCAAGTGCT CTCGCCATAA AAACATATTC ATTGTTTTTA AACACTTAAA AGACAACGCT
CTGCCAATAA CTGTAGATTC AGCTTGGGAA GAGCTGTTAA GAAGGCGTGT CAAAGATATA
GATAAGTCTT ATCTCGGTAT AATGTTACAT GATGCCATGT TTAACGATAA GCTCAGGCCT
ATTTCGCATA CGGTTCTTTT AGATGACTTA AGTGTATGTA GCGCTGAAGA AAATTTAACT
AATTTCATTT TTCGTTCGTT TAATGAATAT AACGAAAATC CATTGAGACG ATCACCATTT
TTACTATTAG ACCGCATAAA AGATCGTCTC GACAGAACTA TCGCAAAAAC TTTTTCTACT
CGTAGCGTTA GAGGACGATC TGTTTATGAT ATCTTTTCTC AAGCAGAACT CGGAGTATTA
GCTCGTATAA AAAAAAGAAG GGCGGCTTAT TCTGAGAATA ATGATTCATT TTATGACGGC
TTGCCAACCG GATATCAAGA TATTGATAGT AAAGGGGTTA TTTTAGCGAA CGGCAATTTT
GTGATAATTG CAGCTCGGCC TTCTATAGGG AAAACCGCAC TCGCTATTGA TATAGCTATC
AATATTGCTA TCCATCAACG ACGTAGAGTT GGTTTTTTAT CTCTTGAAAT GAGTGCAGGG
CAAATAGTTG AAAGAATTAT TTCTAACTTA ACAGGGGTAT CTGGAGAGAA ATTACAAAGG
GGCTCTCTAT CTGAAGAAGA GATTTTTTGC ATTGAAGAAG CAGGAAATAC TATAAGAGAT
TCTCATCTTT ATATTTGTAG TGACAACCAA TATAAGCTCA ATTTGATAGC GAATCAAATT
CGTTTGTTAA AACGAGATGA TCGTGTCGAC GTTATTTTTA TCGATTACTT ACAACTTATT
AACTCATCTG TTGGAGAAAA TCGACAAAAT GAAATAGCAG ATATATCTAG AACTTTAAGG
GGGTTAGCTG CAGAGCTAAA CATTCCTATA GTTTGTTTGT CTCAATTATC CAGAAAAGTC
GAGGATAGAG CAAACAAAGT TCCTATGCTG TCAGACCTAA GAGATAGCGG TCAAATAGAA
CAGGATGCAG ATGTAATTTT GTTCATCAAT AGAAAGGAAA CTTCTCCTAA TTGTGAAATA
ACAGTGGGTA AAAATAGACA TGGATCGGTT TTCTCTACTG TATTACAGTT CGATCCAAAA
ACAAGTAAGT TCTCTGCTAT TAAAAAAGTA TGGTAA
|
|---|
| Protein sequence | MKTNSEIENR MQDIEYALLG KALVFEDCTE YILRQLVNYE FKCSRHKNIF IVFKHLKDNA
LPITVDSAWE ELLRRRVKDI DKSYLGIMLH DAMFNDKLRP ISHTVLLDDL SVCSAEENLT
NFIFRSFNEY NENPLRRSPF LLLDRIKDRL DRTIAKTFST RSVRGRSVYD IFSQAELGVL
ARIKKRRAAY SENNDSFYDG LPTGYQDIDS KGVILANGNF VIIAARPSIG KTALAIDIAI
NIAIHQRRRV GFLSLEMSAG QIVERIISNL TGVSGEKLQR GSLSEEEIFC IEEAGNTIRD
SHLYICSDNQ YKLNLIANQI RLLKRDDRVD VIFIDYLQLI NSSVGENRQN EIADISRTLR
GLAAELNIPI VCLSQLSRKV EDRANKVPML SDLRDSGQIE QDADVILFIN RKETSPNCEI
TVGKNRHGSV FSTVLQFDPK TSKFSAIKKV W
|
|---|
| |