Gene Ssol_2616 details

Gene Information

• Locus tag: Ssol_2616
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: -
• Start bp: 2399985
• End bp: 2400599
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 35%
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: ACX92721
• Protein GI: 261603118

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.417576
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAAAAT CACCATTTGA AGCAACAATC CTAATTGAGG AGCACCCTTG TGAAGTAATG 
AAGATAATAT CTAGTACTGG GCTTAAAGGT GTTGTTGATA ACGTTAAACT TGGAGATAAT 
ACAACCGATC ACATAGTACT TTTCGAAAAA GAGGTCCAAA AAGATGATCT AATTAAGCTT 
AAATCGCATA GTACTAAGGT TTTAAGGCTT AACGATAACA AGATATGGGT TAGAACTTAC 
GGATGTGCAG TATGTAAGAT TCTATATACT TCAAACGTCG TTGTAGAGAA AATAAAGGTA 
GTAAGAGAGA GGACATTGCT CTATACTCTC TTAATCCCTA ATACGATGGC ACTTAAGGAA 
TTTCTGGCAA GCCTCATAAG TCAAGATATA GAGTTTACAG TGCTAAGCAC TTCTGAAATA 
AGTAGTAATG AGTTAACTGA TAGACAAATG GAAATATTGA AGCTTGCGTA TAAGATGGGT 
TATTTCGATG ACGATAGGAG GGTTACTTTA ACTGAGCTAG CAAAACAATT GGGAATTTCT 
ACACCAACTT TAGAGGAGAT TTTGCGTAGG GCTTTAAGGA AAGTTGTCAA GTTTTACTTA 
GATAAGGTAA GATAG 

 

Protein sequence

MLKSPFEATI LIEEHPCEVM KIISSTGLKG VVDNVKLGDN TTDHIVLFEK EVQKDDLIKL 
KSHSTKVLRL NDNKIWVRTY GCAVCKILYT SNVVVEKIKV VRERTLLYTL LIPNTMALKE 
FLASLISQDI EFTVLSTSEI SSNELTDRQM EILKLAYKMG YFDDDRRVTL TELAKQLGIS 
TPTLEEILRR ALRKVVKFYL DKVR