Gene Ssol_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_2562 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp2353735 
End bp2354193 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content44% 
IMG OID 
Producthelix-turn-helix Psq domain protein 
Protein accessionACX92679 
Protein GI261603076 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAAAT CCAGAATGCA CGGTATAAGG CTCAACAAGA AACAAGAGGA AGAGAGGAGG 
ATTAACGCTG TAAAAGATGT GAGGAACGGG ATGAGTATAA AGGACGTTGC CAAGAAGTAT
GACGTCTCCA TCTTTACCGT GTACAAGTGG TTGAGGAAAG GTGACCTGAG CGCTAAGCCG
AGGAAGGGAC CCACGAAACT GAAGGACGAG GAAAAGCTCG TCCGAATCTT AGAAAAGAGC
CCAAGAGATT TCGGCTTGAA CTACGATTTC TGGACCTTGA AGCTCATAGC GTATATACTT
GACAAGGAAT TTGGGATAAA GTACAACCCG AGGAGTTTAA GCCCAGTCCT CAAGAAGTTA
GGCTTCAAGT ACAAGAAAGG AAAGAGAACT TACGTTAGAG ACGATAACGC TGTAGAAAGG
TGGGTGAAGG AACAAGGGGA GAAGCTTTTA AAAAAATAA
 
Protein sequence
MPKSRMHGIR LNKKQEEERR INAVKDVRNG MSIKDVAKKY DVSIFTVYKW LRKGDLSAKP 
RKGPTKLKDE EKLVRILEKS PRDFGLNYDF WTLKLIAYIL DKEFGIKYNP RSLSPVLKKL
GFKYKKGKRT YVRDDNAVER WVKEQGEKLL KK