Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_2454 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | - |
Start bp | 2259106 |
End bp | 2260293 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | |
Product | transposase, IS605 OrfB family |
Protein accession | ACX92603 |
Protein GI | 261603000 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.1066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCACCT TAGGGTTTCG CTTCCGTGCT TACGCTGACG AACAAACCCT TAGGGCGTTA AAAGCCCAGT TGAAGTTAGC GTGCAAAATC TACAACACCT TAAGGTGGGC AGACATCTAC TTTTACCAAA GGGATGGGAA AGGACTAACA CAAACTGAGT TAAGACAGTT GGCTCTAGAT CTGAGAAAAC AAGATGATGA GTATAAGAAA CTCTACTCCC AAGTAGTTCA ACAAATAGCT GACCGTTATT ACGAAGCTAG ACAGAGGTTT TTCGACGGTT TAGCACGTTT CCCGAAAGAA AGGAAACCTC ACAAGTACTA CTCCCTTGTC TATACGCAAA GCGGTTGGAA AATACTTCAA GTTAGAGAAA TAAGAAAAGG AAGCAAGAAG AAACTAATAA CGCTTAAACT ATCAAATCTT GGTACGTTCA AGGTAATAGT TCACCGAGAC TTTCCCCTTG ACAAAGTAAA GAGAGTGATA GTGAAGCTAA CAAGATCTGA GAGGATTTAC ATCACTTTCG TAGTTGATCA CGAATTCCCC AAGTTACCTA ACACTGGTAA GGTAGTGGCG ATAGATGTTG GTGTAGAAAA GTTGTTAGTA ACGTCAGATG GTGAGTATTT TCCTAATTTG AGACCTTACG AGAAAGCGTT ATGGAAAGTG AAGCATCTAC ACAGAGAACT TTCAAGGAAG AAGTTCCTCT CTAATAATTG GTTTAAGGCT AAGGTTAAGC TTGCTAGGGC TTATGAGTAT TTGAAGAATC TAAGAACGGA TCTTTACATG AAGTTGGGTA AATGGTTTGC TGAGCATTAC GACGTTGTAG TCATGGAGGA CATTCATGTT AAGCAGTTGA TAGGTAAGTC ATTAAGGTCT CTGAGGAGGA GATTGAGTGA CGTCGCGTTC AGCGAGCTTA GAGATTTGAT TAAGTATCAG TTGGAGAAAT ACGGTAAGAA ACTCATCCTA GTTAATCCTG CATACACTTC CAAAACTTGT GCTAAGTGCG GGTACGTAAA AGAAGATCTG TCTCTATCTG ATCGTGTTTT CGTTTGTCCC AACTGTGGTT GGATTGCAGA TCGTGACTAT AATGCTTCTC TTAACATCTT ACGTGGATCG GGGTCGGAGC GACCCTTAGT GTGGAGCTCC GCCCTCTACC AGTACCAGCA CTTCGGTACT GGCATGGCAG AGCTGTGA
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Protein sequence | MPTLGFRFRA YADEQTLRAL KAQLKLACKI YNTLRWADIY FYQRDGKGLT QTELRQLALD LRKQDDEYKK LYSQVVQQIA DRYYEARQRF FDGLARFPKE RKPHKYYSLV YTQSGWKILQ VREIRKGSKK KLITLKLSNL GTFKVIVHRD FPLDKVKRVI VKLTRSERIY ITFVVDHEFP KLPNTGKVVA IDVGVEKLLV TSDGEYFPNL RPYEKALWKV KHLHRELSRK KFLSNNWFKA KVKLARAYEY LKNLRTDLYM KLGKWFAEHY DVVVMEDIHV KQLIGKSLRS LRRRLSDVAF SELRDLIKYQ LEKYGKKLIL VNPAYTSKTC AKCGYVKEDL SLSDRVFVCP NCGWIADRDY NASLNILRGS GSERPLVWSS ALYQYQHFGT GMAEL
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