Gene Ssol_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_2187 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1971784 
End bp1972605 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content36% 
IMG OID 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionACX92381 
Protein GI261602778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.974593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCCA GTACCTCATA TCTATTTGTA AAATGGATGA TTCCAGTGGC AATAGTTTGG 
GGCCTTTCGT ATCCTTTAAC TAAACTCATT ACGTACTACT CGTCGCCTAT GATAGTGAGC
GTTGTTAGAG TGGCAATAGC TAGTGTGTTT TTCATTATAC TAGGCAGAGG TCTTTCAGTT
GGTTTGAAAC AATTTATTAA CGGTTTGTTT AATTTTGTGG GATTGTTAAC GTTTTTAAAC
TTAGGCGTCT ATTTTTCCTC TAATCCCGGT TTAGTAGCAG TTATGATATA TACTCAGCCA
CTATTTATCC TTATTATAGA GACGATCTTA GGAACCAAAG TTAAGGCGAA AGGAATTATT
GGAATAATTT TAGGTGTAAT AGGAGTTACA GCATCGGCTT TCCTATCATT TGATTTAGGG
CTTTTGTTTG GTCTAGTAGG AGGTTTAGTA TGGGCTATTG GTACAGTATA TTACAAGAGA
AATTTAGTTA AGGAAGACTT AGTGAAGTTA AACGGATTCA TGGGAATAAC GTCACTGCCA
ATCCTATTAC TCTTAACACC AATTGGATAT CATTTCGTGG TTAACGTAAT GAATATTGGA
TTGCTATTAG CTTTAGGGTT GATTTCGCAA GTTGGAGGAT TCTATTTCTG GTTTAATGCG
GTTAAGCATT TGGGAAGTGT TAAGGCTGGA TCTGGTTCAT TGTTAGTTCC GATAATGGCT
TACGTATTGT CTTATGCGTT CTTTAGAGAG ATCCCTACAC CATTGCAAAT TATTGGTTCT
GCAATAACGC TATTGGGAGT ATACTTGACT ATGACTAGCT AA
 
Protein sequence
MSSSTSYLFV KWMIPVAIVW GLSYPLTKLI TYYSSPMIVS VVRVAIASVF FIILGRGLSV 
GLKQFINGLF NFVGLLTFLN LGVYFSSNPG LVAVMIYTQP LFILIIETIL GTKVKAKGII
GIILGVIGVT ASAFLSFDLG LLFGLVGGLV WAIGTVYYKR NLVKEDLVKL NGFMGITSLP
ILLLLTPIGY HFVVNVMNIG LLLALGLISQ VGGFYFWFNA VKHLGSVKAG SGSLLVPIMA
YVLSYAFFRE IPTPLQIIGS AITLLGVYLT MTS