Gene Ssol_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_2088 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1868995 
End bp1870050 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content39% 
IMG OID 
ProductRadical SAM domain protein 
Protein accessionACX92294 
Protein GI261602691 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTAC GTCTAATTTC AAGTCCAGAT TGGGTAAGAC TAAGTTTTGG CGCAGATATG 
GTCTTAGGTT TTTCTTCTGG AGTGTTTTTA AAGGGAGCTC TGAATACCAC GATAAATCTG
TTGCAATATT ACCCAGATGG ATGCAAAGCA AATTGCTCAT ATTGTGGCCA AGCTAGAGAG
GTCGCCAATG GTCCAGAATG TAAAACGTTA ATAAGGGTAG AATGGCCACT TAGACCTCTA
AATGAGGTAT TAAAGAGAAT TTATGAGAGA CAAGGCAATC CAGAATACGG TCTTCAAAGG
ATATGTATAG GACAATTGGC CCATCCTAGG GCATCTCCAG ATGCCATAGA GATAACGAGA
AGGATAAGAA ATGCGGGGAT TGAGCTACAA ATTTCAGAAT TAGTTACAGC AACTTATACT
TTCAAACATC ACATGATTGA AATGAGGAAA GCTGGAGCTG ATATGATTGA TGTTGCAATA
GACGCGGCAA ATGAGAAGGT GTTTGAAGAG CTAAGGGGTA AGAAAGCTAG AAGCATGCAC
TCATGGAAGA GATATTTAGA GGCAATAGAT GAAGCTGTGG AAGTATTTGG TAAAAAGAAC
GCTGGTATTC ACTTAATAAT AGGTTTAGGG GAGAGTGAGA AAGACGCAGT CAACCTTATG
TGGTACGCTC ATAGTAGGGG AGCTAAAATT TCACTCTTTG CGTTTTATCC AGAGGCTGGT
ACTCCAATGG AAAAACGAAA ACCAGTCCCA GTTCACGTCT ATAGAAGGAT GCAAATAGCT
AGATGGCTGA TTGAAAATGA TATTGTCGAT ATTAATGCGT TCAAGTTTGA CGACAAGGGA
GAACTAATAG ATGTAGAAAT ACCGTCCGAT ATAACCTTAA ATGAATTAGC CCCAGCATTT
ATGACTAGTG GATGTCCAGG TTGTAACAGA CCATATTCCA ATGAGAGGCC AGGTAGAGTA
TTAAAGAACG TTCCTTGGTA TCTAGACAGA GAAATGACTT TACGTTCAAT TAAAGCTTCC
AGATTAGATT CCTTAATAAA GAAAGTAGTA AGGTAA
 
Protein sequence
MTLRLISSPD WVRLSFGADM VLGFSSGVFL KGALNTTINL LQYYPDGCKA NCSYCGQARE 
VANGPECKTL IRVEWPLRPL NEVLKRIYER QGNPEYGLQR ICIGQLAHPR ASPDAIEITR
RIRNAGIELQ ISELVTATYT FKHHMIEMRK AGADMIDVAI DAANEKVFEE LRGKKARSMH
SWKRYLEAID EAVEVFGKKN AGIHLIIGLG ESEKDAVNLM WYAHSRGAKI SLFAFYPEAG
TPMEKRKPVP VHVYRRMQIA RWLIENDIVD INAFKFDDKG ELIDVEIPSD ITLNELAPAF
MTSGCPGCNR PYSNERPGRV LKNVPWYLDR EMTLRSIKAS RLDSLIKKVV R