Gene Ssol_2054 details

Gene Information

• Locus tag: Ssol_2054
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: +
• Start bp: 1843131
• End bp: 1843808
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 33%
• Product: ABC transporter related protein
• Protein accession: ACX92260
• Protein GI: 261602657

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.198062
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGTAA TAAGACTTGA AAATGTTACC AAGATCTATG AGGGGAATGT TAAGACTATT 
GCACTTAGAG ATATAAACCT AAGTATTGAT GAAGGGGAGT TTATTTCAAT ATTAGGACCT 
TCTGGCAGTG GAAAATCTAC TCTCTTATCA ATCTTAGGAA TTTTGGATAG ACCATCACAA 
GGAAAGGTAT ACATTTACGA AGTTGACGTA ACTAAACTAA GTGATAACGA GATCTCTAAA 
ATTAGAAACG AATACATAGG CTTTGTGTTT CAGAATTTCA ATCTAATTCA AAGACTTAGT 
GTTCTACAAA ACGTTGAGTT ACCATTAGTA GCTAGAGGAA TACCAAAAAA GAAAAGAGAG 
GAAATTGCGA TAAATTCTCT AAAACTAGTG GGATTAGATG GATTAATAAA TAAAAAACCA 
TCTGAACTTT CTGGAGGACA GCAGCAAAGA GTTGCCATAG CTCGTGCATT AGCACAAAAT 
CCAAAGATCA TATTAGCTGA TGAACCTACC GGAAATTTGG ATAGTAGTAA TGCAAAAATT 
GTAATGAACA TATTCAAAAA GATTAACGAG GAGTTTAAAA CTACGATAGC AGTAGTAACA 
CATGATAGAG AAGTTGCGAG TTATACAAAG AGAAAGATAT ACATTAGAGA TGGAAAGATA 
GTTGGTGAAG AAAGATGA 

 

Protein sequence

MSVIRLENVT KIYEGNVKTI ALRDINLSID EGEFISILGP SGSGKSTLLS ILGILDRPSQ 
GKVYIYEVDV TKLSDNEISK IRNEYIGFVF QNFNLIQRLS VLQNVELPLV ARGIPKKKRE 
EIAINSLKLV GLDGLINKKP SELSGGQQQR VAIARALAQN PKIILADEPT GNLDSSNAKI 
VMNIFKKINE EFKTTIAVVT HDREVASYTK RKIYIRDGKI VGEER