Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_2003 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | + |
Start bp | 1798464 |
End bp | 1800641 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | Fibronectin type III domain protein |
Protein accession | ACX92213 |
Protein GI | 261602610 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.333921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTATG GTAATATGAA AAAATGGGCG CCATTAATAT TATTTCTATT TTCTCTATTA TTATTACAAG GAATATCTCT TCATGCCTCT TCACCGTCAT TTTCCGTGAA TGCAAGTTAT TTAGCATCAT TGCCTTACGC AAATTCTCAT GTCGCAGTAG TATACTATCA AGGTAGCTTA TATATCATAG GTGGGGATTC ACATTCAAAC CAAGTTTGGA TATACTCCAA TGGCACATGG AATATCGGGC CTAGTTTGCC TTTTAGTTTA GTTTCACCTT CAGCAATCGT CTATAATAAC ACAATTTATG TTATGGGTGG TTATAATAGC ACTGGGATAA ATCCTTACGT TCTTAAACTT AATGGTAATT CTTGGGTTGT CGTAAGTGAA ATGCCACTCC CAGCATACTC ACCTTACATA TTTGTTTATA ATAATGCGAT TTACGTTATT GGTGGAGAGA ACACCACTAG CCCAGCTGGC CTTTATTTTC CACCTTCTAA TGCAATTAGA TTATTCTACC CCAATAACGA TAGTTGGAGG ATAATAGGTT ACATGCCAGT TCCTACATAT GGAGGTGGGT ATGTATTTAA TGGGACTTCC TTGATAATAG TTAGCGGTTA CATTGGATAT AGTGCCTATA CCAATGACAT ATTGATTTAT AGTCCACAAA ACAATAATTG GACTATTCTT AATGGCGTTC TTCCCTACTG GATTCACGAT AGTGCCTTAG CCTATTATAG GGGTGTTTTG TTTATTGTGG GTGGTTATAT TTATACTGCA GGTTCTGGTG GGGTTAATAA CGCAATCCTT GCCTACTATA ATGGTAATTT GCAAAGAGTT GGATATCTTC CCGTCCCAGT ATATTCTGCT GGTTATGTAC AAGTAGGAAA TATGTTGTAT CTTGCTGGAG GCATTGGTAG TTCATTAAGT GATGTCTCTG CTTTACAGCT AATCACGTTT AACTTCCCAC CTCTTCCCCC TAAGATAACC TCTTATTCTG CAGGAAATGA ATCCGTTACC TTAGGCTGGA ATCCAGTTAG ACTATCTAGT GGTTATGAGA TAATATATTG GAATAACATG GGATTCAACA GCTCAATTAA TGTAGGTAAC GTTACTAGTT ACACTGTAAC TGGTTTGAAA GATGGTATAA CATACTACTT TGAGGTTTTA GCTTATAATT CAATTGGCTA TTCTTCTCCC TCAAGTATAA TCGCGTTAAC TCCAGCTTCA GTTCCTAACC CTCCACAACT CGTTTCTGTG AAGTACGGTA ATGATAATGT TACATTGAAT TGGTTGCCTC CAACTTTTTC TGGAGGCTAT CTTTTACTAG GTTATTACGT TATTGTTAAG AACGAGAATT CGATGGTTAG CTCACATTTC GTTAATAGTA CTAGTTTGAC AATAAGTAAT CTGACACCAA ACGTGACTTA TAACGTTTTC ATTTACGCTG TAAATAAGCT TGGTAATAGC TCTCCCCTAG TACTTACCGT TGTTCCAATT ACCAAGGCTA GTGTTTTTGC ATTTATAACT AAACTGGGAA ATGGAATTTT AGTCAATTGG ACTACTTCTT TCCCAGCTAA TATAACTTTG GAACTGTATA ATCCTAATGG TAACTTAATT TCTCAGATTG CAGCTATAAA GGGTAATAGT AGCTATTTGT TTAGAGTACC TCAAGGTAAT TATACGCTAG TAATAATAGC TTCAAACTCA GCTGGGGTTT CTAAATACGT TTATCAAGTA GTTTACTATT TACCACCAGC CTCTCCGCAA GTCTCGCTTA TCGGATTTGG AAATAATCTG TACATTAGTT GGAATAATGA AGCGAATGTA ATCACATATC TCGTTTACGT TAATAATAGT CTGGTTTATG AGGGACCAAG TAATAGCATT GTGACTAATA TTAGTAATGG TACTTATTTA GTAAAGGTTA TCGGTGTGAA TCCAGCTGGC TCTTCATCTC CTGGCATTGC TGTAATTCAC TATACCGGTG ATTACGTCAC TGTGGTTAAG ATGAAGGTTG TTAATGTTAC TATTGTCAGT AAGATCGCTT CGGCAGTATC AGGTAATGGC AATAATTTAA GTTTAGGTCA AAGTATTGTT ATCATATTAC TGGCTGTAAT GATTTTGTTG AGTATTGCTA TTATTACGAG AAATAGGAGC AATGGATTTG ATTGGTAA
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Protein sequence | MKYGNMKKWA PLILFLFSLL LLQGISLHAS SPSFSVNASY LASLPYANSH VAVVYYQGSL YIIGGDSHSN QVWIYSNGTW NIGPSLPFSL VSPSAIVYNN TIYVMGGYNS TGINPYVLKL NGNSWVVVSE MPLPAYSPYI FVYNNAIYVI GGENTTSPAG LYFPPSNAIR LFYPNNDSWR IIGYMPVPTY GGGYVFNGTS LIIVSGYIGY SAYTNDILIY SPQNNNWTIL NGVLPYWIHD SALAYYRGVL FIVGGYIYTA GSGGVNNAIL AYYNGNLQRV GYLPVPVYSA GYVQVGNMLY LAGGIGSSLS DVSALQLITF NFPPLPPKIT SYSAGNESVT LGWNPVRLSS GYEIIYWNNM GFNSSINVGN VTSYTVTGLK DGITYYFEVL AYNSIGYSSP SSIIALTPAS VPNPPQLVSV KYGNDNVTLN WLPPTFSGGY LLLGYYVIVK NENSMVSSHF VNSTSLTISN LTPNVTYNVF IYAVNKLGNS SPLVLTVVPI TKASVFAFIT KLGNGILVNW TTSFPANITL ELYNPNGNLI SQIAAIKGNS SYLFRVPQGN YTLVIIASNS AGVSKYVYQV VYYLPPASPQ VSLIGFGNNL YISWNNEANV ITYLVYVNNS LVYEGPSNSI VTNISNGTYL VKVIGVNPAG SSSPGIAVIH YTGDYVTVVK MKVVNVTIVS KIASAVSGNG NNLSLGQSIV IILLAVMILL SIAIITRNRS NGFDW
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